Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 snoU109.2-201ENST00000459316 135 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 RN7SL41P-201ENST00000476144 297 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 KC877373.1-201ENST00000479066 408 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 HMGB1P22-201ENST00000505315 124 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 AC026402.1-201ENST00000513642 170 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 RNU6-1338P-201ENST00000516328 91 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 RNU6-406P-201ENST00000516470 107 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 RNA5SP165-201ENST00000517142 115 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 AP002770.2-201ENST00000543613 532 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 AC012603.1-201ENST00000606424 528 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.16□□□□□ -1.58
NOD1Q9Y239 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.16□□□□□ -1.58
NOD1Q9Y239 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NOD1Q9Y239 AP001029.2-203ENST00000589795 4910 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 ZFRP1-201ENST00000457579 2970 ntBASIC5.16□□□□□ -1.58
NOD1Q9Y239 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NOD1Q9Y239 AC107068.1-201ENST00000563286 4218 ntBASIC5.15□□□□□ -1.58
NOD1Q9Y239 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NOD1Q9Y239 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
NOD1Q9Y239 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NOD1Q9Y239 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
NOD1Q9Y239 RNU1-35P-201ENST00000362782 153 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 Y_RNA.277-201ENST00000364754 102 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 RNU6-336P-201ENST00000364891 107 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.15□□□□□ -1.59
NOD1Q9Y239 RPL7AP25-201ENST00000423357 805 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 snoU13.24-201ENST00000458998 104 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.15□□□□□ -1.59
NOD1Q9Y239 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.15□□□□□ -1.59
NOD1Q9Y239 RNU4-71P-201ENST00000516258 113 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 MIR2355-201ENST00000517199 87 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 RNA5SP291-201ENST00000517222 105 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 CASP1P1-201ENST00000526345 212 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.15□□□□□ -1.59
NOD1Q9Y239 AC004792.1-201ENST00000614523 137 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 BMS1P21-201ENST00000634565 365 ntBASIC5.15□□□□□ -1.59
NOD1Q9Y239 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NOD1Q9Y239 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
NOD1Q9Y239 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NOD1Q9Y239 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.15□□□□□ -1.59
NOD1Q9Y239 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NOD1Q9Y239 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 Y_RNA.150-201ENST00000363562 102 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 Y_RNA.180-201ENST00000363867 113 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 Y_RNA.270-201ENST00000364693 104 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 RNU6-741P-201ENST00000383889 107 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 SNORD58.1-201ENST00000391313 66 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 RPS29P13-201ENST00000402041 169 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 AL356387.2-201ENST00000422272 243 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 RPS6P12-201ENST00000432491 726 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 BX679664.1-201ENST00000434429 253 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 U8.22-201ENST00000459141 133 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 SNORD108-201ENST00000459332 71 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 RN7SL303P-201ENST00000469773 251 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 ANXA2P1-201ENST00000505539 926 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 SNORA31.9-201ENST00000516429 84 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 MIR3160-1-201ENST00000577972 85 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 IPO5P1-202ENST00000600039 287 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 Y_RNA.772-201ENST00000606692 102 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 BX284668.6-201ENST00000606899 438 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 U4.7-201ENST00000638126 106 ntBASIC5.14□□□□□ -1.59
NOD1Q9Y239 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NOD1Q9Y239 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NOD1Q9Y239 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NOD1Q9Y239 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NOD1Q9Y239 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NOD1Q9Y239 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 Y_RNA.16-201ENST00000362421 102 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 RNY1-201ENST00000364228 113 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 SNORA5.1-201ENST00000384275 131 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 SNORA57.1-201ENST00000391227 145 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 AL590762.2-201ENST00000395798 571 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 RNU2-68P-201ENST00000410878 191 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 RPS12P10-201ENST00000427031 377 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 RPS23P5-201ENST00000495419 428 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 RNU6-789P-201ENST00000517105 102 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 AC022868.1-201ENST00000517767 391 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 AC007224.1-201ENST00000564410 144 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 RNF138P2-201ENST00000603490 592 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.13□□□□□ -1.59
NOD1Q9Y239 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.13□□□□□ -1.59
NOD1Q9Y239 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms