Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 RNU6-801P-201ENST00000364087 105 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 MIR548A1-201ENST00000385041 97 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 MIR34A-201ENST00000385130 110 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 MT-TC-201ENST00000387405 66 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 SNORD78.1-201ENST00000390866 65 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 AL592291.1-201ENST00000403830 352 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 RPS27AP12-201ENST00000429552 465 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 AC010095.1-201ENST00000443543 144 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 snoU13.20-201ENST00000459180 104 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 SNORA31.22-201ENST00000517204 135 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 AL138963.2-201ENST00000605137 226 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 PSMD5-AS1-215ENST00000640622 205 ntBASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TRIM35Q9UPQ4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM35Q9UPQ4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
TRIM35Q9UPQ4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 MIR133A2-201ENST00000347538 102 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 SNORA74A-201ENST00000364089 198 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 RNU2-54P-201ENST00000410299 190 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 EIF4A1P11-201ENST00000451239 222 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 RPL23AP56-201ENST00000460778 453 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 RNU6-1198P-201ENST00000516904 67 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 MIR4436B2-201ENST00000581415 91 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 MIR4436B1-201ENST00000583272 91 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 ZNF720P1-201ENST00000562403 1939 ntBASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
TRIM35Q9UPQ4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AL645733.1-201ENST00000402250 217 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AC138623.1-201ENST00000418060 216 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 HSPE1P21-201ENST00000438283 308 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 RPL23AP24-201ENST00000458203 385 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AC231760.1-201ENST00000498002 260 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 ENPP7P11-201ENST00000505915 627 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AC021006.3-201ENST00000530771 192 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AC018448.1-201ENST00000552843 316 ntBASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.51□□□□□ -1.37
TRIM35Q9UPQ4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RNU6-766P-201ENST00000362478 107 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 Y_RNA.329-201ENST00000365209 107 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 SNORA29-201ENST00000384183 140 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 SNORA26.5-201ENST00000391215 123 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RNU6-592P-201ENST00000411333 103 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 AL590399.4-201ENST00000436561 601 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RPL39P29-201ENST00000447779 157 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 AC000111.2-201ENST00000448200 210 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 Y_RNA.649-201ENST00000459077 103 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RN7SL319P-201ENST00000480656 221 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RFPL4AP5-201ENST00000514977 504 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RNU5F-2P-201ENST00000516066 82 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 RNU6-1095P-201ENST00000516148 108 ntBASIC6.5□□□□□ -1.37
TRIM35Q9UPQ4 CYCSP23-201ENST00000519781 313 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms