Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 RPL23AP97-201ENST00000568955 471 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 AC098826.3-201ENST00000603823 466 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 AC107294.1-201ENST00000609524 467 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 MIR8076-201ENST00000611401 83 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 AL450472.1-202ENST00000637286 180 ntBASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP4E1Q9UPM8 AC027290.2-201ENST00000623210 18662 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC007685.1-201ENST00000329806 452 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 Y_RNA.33-201ENST00000362591 102 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 SNORD50.1-201ENST00000362987 71 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 MIR585-201ENST00000384887 94 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 SNORD115-46-201ENST00000390982 71 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 MTCO2P33-201ENST00000402100 465 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 HDGFP1-201ENST00000405943 252 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AL139156.1-201ENST00000412785 841 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 SNORD56-201ENST00000413522 71 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AL592148.1-201ENST00000413568 445 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 TMSB10P2-201ENST00000416049 131 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AL117339.3-201ENST00000418733 162 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 MTND3P9-201ENST00000429526 346 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 CKS1BP5-201ENST00000434172 273 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AL359073.1-201ENST00000448036 403 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 RPS29P22-201ENST00000472363 168 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 RPS23P1-201ENST00000491662 432 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 RPS23P5-201ENST00000495419 428 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC010469.2-201ENST00000496412 480 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 DEFB108E-201ENST00000524692 240 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC084851.1-201ENST00000529105 249 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AL161713.1-201ENST00000555538 145 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC136932.1-201ENST00000574771 208 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 MIR3910-1-201ENST00000580936 111 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AP000787.2-201ENST00000604432 568 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC091979.2-201ENST00000607514 214 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AL138721.1-201ENST00000616756 179 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AC243829.7-201ENST00000633081 225 ntBASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP4E1Q9UPM8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 AL592182.3-201ENST00000642132 3304 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-37P-201ENST00000362692 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU5A-1-201ENST00000362698 116 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 SNORD81.1-201ENST00000363064 77 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-11P-201ENST00000364234 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-512P-201ENST00000364438 103 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-7-201ENST00000364784 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-8-201ENST00000365467 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-25P-201ENST00000383873 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-1-201ENST00000383898 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-48P-201ENST00000384161 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-36P-201ENST00000384172 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-4P-201ENST00000384205 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-5P-201ENST00000384238 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-3P-201ENST00000384314 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-16P-201ENST00000384385 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-15P-201ENST00000384534 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-2-201ENST00000384627 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-29P-201ENST00000384637 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RNU6-9-201ENST00000384776 107 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 MIR301A-201ENST00000385261 86 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 MIR3065-201ENST00000390137 79 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 AC079354.2-201ENST00000453523 154 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 U8.21-201ENST00000459536 136 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 IGLVIV-65-201ENST00000517313 360 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 AC100770.1-201ENST00000532310 322 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 RN7SL176P-201ENST00000580352 264 ntBASIC4.56□□□□□ -1.68
AP4E1Q9UPM8 MIR4300-201ENST00000581016 96 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms