Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 TAF9P1-201ENST00000445421 515 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 TAF9P2-201ENST00000454958 515 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 CKS1BP2-201ENST00000497342 240 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 RNU6-143P-201ENST00000516942 93 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 AC174048.1-201ENST00000603389 144 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 U4.3-201ENST00000621047 82 ntBASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM4Q9ULL8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AL137003.2-201ENST00000606924 2538 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AL021407.1-201ENST00000404531 386 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AC104651.1-201ENST00000427559 735 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AL714022.1-201ENST00000439897 151 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 NEFMP1-201ENST00000443423 1006 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AL353705.4-201ENST00000449661 238 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 RPS27AP8-201ENST00000452665 445 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AC234781.5-201ENST00000508429 271 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 MIR3605-201ENST00000583214 100 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 U73023.1-201ENST00000603134 700 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 DPPA3P3-201ENST00000603842 430 ntBASIC4.86□□□□□ -1.63
SHROOM4Q9ULL8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 MAPK10-322ENST00000641485 4530 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 RNU6-960P-201ENST00000364056 120 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 SNORA40.3-201ENST00000390964 122 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 BTF3P7-201ENST00000407097 488 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 RPLP0P7-201ENST00000416050 667 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 MTND4P25-201ENST00000441039 533 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 HMGN2P23-201ENST00000456759 269 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 RNU6-953P-201ENST00000459154 107 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 SNORA31.3-201ENST00000516029 96 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AP006587.4-201ENST00000526053 529 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AP003122.4-201ENST00000530980 758 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AC137800.2-201ENST00000574375 120 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AC005771.1-201ENST00000585581 349 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AC008250.2-201ENST00000615261 205 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 AC022079.1-201ENST00000621546 602 ntBASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM4Q9ULL8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 ZNF355P-201ENST00000427301 3216 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 RNU6-511P-201ENST00000363496 107 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 Y_RNA.226-201ENST00000364337 114 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 RNU1-73P-201ENST00000383971 164 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 RNA5SP354-201ENST00000391247 136 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 RPS3AP3-201ENST00000411933 242 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 AC010620.2-201ENST00000600135 313 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 Z94722.1-201ENST00000604328 474 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 AC073114.1-201ENST00000612027 490 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 AL603839.4-201ENST00000624658 1005 ntBASIC4.84□□□□□ -1.63
SHROOM4Q9ULL8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SHROOM4Q9ULL8 ELL2P3-201ENST00000457883 1602 ntBASIC4.84□□□□□ -1.64
SHROOM4Q9ULL8 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AC010680.1-201ENST00000590024 3590 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 RPL23AP32-201ENST00000395315 459 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AC096638.1-201ENST00000444678 216 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 HMGB3P8-201ENST00000449709 577 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 RNU7-23P-201ENST00000459465 62 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 SNORD42A-201ENST00000459584 64 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AC006483.1-201ENST00000487308 313 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 NDUFB4P2-201ENST00000509515 391 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 RNU7-51P-201ENST00000516560 62 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 RNA5SP337-201ENST00000517007 109 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AC068135.2-201ENST00000569293 1028 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 MTCO3P24-201ENST00000572729 782 ntBASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
SHROOM4Q9ULL8 AC002543.1-201ENST00000299783 1954 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms