Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 MYL8P-204ENST00000431574 518 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 CBWD4P-201ENST00000445695 655 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 MTND1P18-201ENST00000448191 573 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 RPL37P4-201ENST00000448908 268 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 MTND3P16-201ENST00000452205 344 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 SNORD109B-201ENST00000458961 67 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 RNU6-333P-201ENST00000459117 107 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 SNORD109A-201ENST00000459128 67 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AC010631.1-201ENST00000474150 156 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 MTND3P22-201ENST00000510932 243 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 LRRC34P2-201ENST00000514850 553 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 SNORA31.22-201ENST00000517204 135 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AC107953.1-201ENST00000522216 297 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 GLYCAM1-201ENST00000546596 285 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AL034351.1-201ENST00000605288 668 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AC100810.6-201ENST00000638068 285 ntBASIC3.82□□□□□ -1.8
CCNL1Q9UK58 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CCNL1Q9UK58 AL136964.1-201ENST00000622038 2990 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 MTND4P29-201ENST00000503122 1372 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU6-552P-201ENST00000362869 119 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU6-522P-201ENST00000364497 107 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 SMIM11P1-201ENST00000369586 178 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU6-1029P-201ENST00000384109 107 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 MIR196B-201ENST00000384852 84 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AL162578.1-201ENST00000406202 378 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU4-65P-201ENST00000410473 140 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 Y_RNA.615-201ENST00000410769 117 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU6-193P-201ENST00000410977 107 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU6-373P-201ENST00000411247 98 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 PPP1R11P2-201ENST00000423543 382 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 MTCO3P45-201ENST00000443036 613 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU7-180P-201ENST00000459240 63 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AC021205.2-201ENST00000480069 347 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 MTCO3P9-201ENST00000506989 781 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 FGF7P4-201ENST00000509595 295 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU6-1092P-201ENST00000516955 87 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AL118558.2-201ENST00000556294 238 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RNU6-89P-201ENST00000606519 100 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 AL603758.1-201ENST00000618654 241 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 MIR4727-201ENST00000622232 55 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCNL1Q9UK58 TAB3P1-202ENST00000452645 1634 ntBASIC3.81□□□□□ -1.8
CCNL1Q9UK58 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 Y_RNA.142-201ENST00000363491 102 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 RNU6-1284P-201ENST00000363701 100 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 Y_RNA.166-201ENST00000363730 102 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 SNORD115-7-201ENST00000365306 82 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 RNU6-641P-201ENST00000384006 107 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 Y_RNA.535-201ENST00000384612 99 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 RNU6-837P-201ENST00000391056 108 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AL356432.1-201ENST00000405809 419 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AL592148.1-201ENST00000413568 445 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 RPL21P24-201ENST00000413752 448 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 MTCO3P46-201ENST00000425787 232 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AL513124.1-201ENST00000450410 614 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 RNU7-182P-201ENST00000459009 62 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AC098591.2-201ENST00000510152 315 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AC078814.3-201ENST00000553036 491 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 MIR4703-201ENST00000577728 79 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 MIR5583-1-201ENST00000580941 59 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AC011712.1-201ENST00000588959 234 ntBASIC3.8□□□□□ -1.8
CCNL1Q9UK58 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CCNL1Q9UK58 MTCO1P9-201ENST00000505577 1534 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms