Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL359385.1-201ENST00000456509 365 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
SCN11AQ9UI33 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SCN11AQ9UI33 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN11AQ9UI33 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.9□□□□□ -2.27
SCN11AQ9UI33 AC107626.1-201ENST00000471084 183 ntBASIC0.9□□□□□ -2.27
SCN11AQ9UI33 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SCN11AQ9UI33 AC023141.11-201ENST00000508864 202 ntBASIC0.9□□□□□ -2.27
SCN11AQ9UI33 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.9□□□□□ -2.27
SCN11AQ9UI33 AC006270.3-201ENST00000605967 1036 ntBASIC0.9□□□□□ -2.27
SCN11AQ9UI33 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.27
SCN11AQ9UI33 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.89□□□□□ -2.27
SCN11AQ9UI33 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SCN11AQ9UI33 RNA5SP499-201ENST00000363982 119 ntBASIC0.89□□□□□ -2.27
SCN11AQ9UI33 RNU6-1328P-201ENST00000410938 106 ntBASIC0.89□□□□□ -2.27
SCN11AQ9UI33 AC012497.1-201ENST00000429392 575 ntBASIC0.89□□□□□ -2.27
SCN11AQ9UI33 PTENP1-201ENST00000447117 1215 ntBASIC0.89□□□□□ -2.27
SCN11AQ9UI33 AC103851.1-201ENST00000506833 274 ntBASIC0.89□□□□□ -2.27
SCN11AQ9UI33 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.89□□□□□ -2.27
SCN11AQ9UI33 SNORA48.11-201ENST00000517015 89 ntBASIC0.89□□□□□ -2.27
SCN11AQ9UI33 DUSP12P1-201ENST00000612874 516 ntBASIC0.89□□□□□ -2.27
SCN11AQ9UI33 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SCN11AQ9UI33 VTRNA1-3-201ENST00000365645 89 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 AC117454.1-201ENST00000491120 168 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 RNU6-115P-201ENST00000364310 107 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 RNU6-1235P-201ENST00000384559 107 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 TPTE2P6-202ENST00000445572 1007 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 RNU6-498P-201ENST00000459468 107 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 AC067942.3-201ENST00000512025 362 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 RNU11-2P-201ENST00000516898 142 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 RNA5SP165-201ENST00000517142 115 ntBASIC0.88□□□□□ -2.27
SCN11AQ9UI33 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.88□□□□□ -2.27
SCN11AQ9UI33 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 MIR493-201ENST00000385254 89 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AL109913.1-201ENST00000421173 514 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 RPL31P35-201ENST00000431058 377 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 MTCYBP29-201ENST00000436327 1006 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 BNIP3P25-201ENST00000596023 559 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AL360181.4-201ENST00000621752 134 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AC090517.3-201ENST00000625170 141 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 AC004808.1-201ENST00000627671 721 ntBASIC0.87□□□□□ -2.27
SCN11AQ9UI33 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
SCN11AQ9UI33 RNU6-1249P-201ENST00000363237 111 ntBASIC0.86□□□□□ -2.27
SCN11AQ9UI33 RN7SKP61-201ENST00000410642 295 ntBASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AC018630.2-202ENST00000422992 927 ntBASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.86□□□□□ -2.27
SCN11AQ9UI33 SCARNA3-201ENST00000517097 143 ntBASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AP003484.1-201ENST00000530974 250 ntBASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AC025588.2-201ENST00000604851 466 ntBASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AP003485.1-201ENST00000625093 753 ntBASIC0.86□□□□□ -2.27
SCN11AQ9UI33 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.86□□□□□ -2.27
SCN11AQ9UI33 ZNF29P-201ENST00000225587 168 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC099548.1-201ENST00000421443 426 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC092047.1-201ENST00000424997 240 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC004812.1-201ENST00000540773 146 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC011260.1-201ENST00000578420 472 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC073544.1-201ENST00000600110 1595 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC093838.1-201ENST00000613014 469 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 MIR6086-201ENST00000638065 55 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 RNU6-666P-201ENST00000363499 107 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 U3.13-201ENST00000364804 214 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AL589655.1-201ENST00000405398 482 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN11AQ9UI33 ZNF965P-201ENST00000432501 817 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 MTCYBP3-201ENST00000445588 1137 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 RNU6-229P-201ENST00000516614 102 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC010186.2-204ENST00000537668 439 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.85□□□□□ -2.27
SCN11AQ9UI33 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC138473.1-201ENST00000605717 526 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC004852.3-201ENST00000614131 326 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 AC243829.3-201ENST00000622177 108 ntBASIC0.85□□□□□ -2.27
SCN11AQ9UI33 RNU6-173P-201ENST00000364215 104 ntBASIC0.84□□□□□ -2.27
SCN11AQ9UI33 RNA5SP125-201ENST00000364843 120 ntBASIC0.84□□□□□ -2.27
SCN11AQ9UI33 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SCN11AQ9UI33 AL161651.1-201ENST00000440882 223 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms