Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 MIR634-201ENST00000385208 97 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 AL160275.3-201ENST00000423876 471 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 AC093019.1-201ENST00000443135 252 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 AL590639.1-201ENST00000456484 337 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 APOOP4-201ENST00000513530 597 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 RNU6-1314P-201ENST00000517139 104 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 BTF3P12-201ENST00000519620 469 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 PSMA3P-201ENST00000555485 635 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 MIR5583-1-201ENST00000580941 59 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 FGF7P1-201ENST00000582820 288 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 AC013553.2-201ENST00000604244 589 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 MIR15A-201ENST00000607334 83 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 AL713922.2-201ENST00000619384 716 ntBASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
DNMT3BQ9UBC3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 U3.19-201ENST00000390893 196 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AL139039.1-201ENST00000401900 692 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 U3.39-201ENST00000408569 239 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 MTND4P28-201ENST00000426217 387 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AL160314.1-201ENST00000490836 438 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 RNU6-914P-201ENST00000516749 109 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC087241.2-201ENST00000535801 324 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC004024.1-201ENST00000549244 247 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 MIR3186-201ENST00000577404 85 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC012493.2-201ENST00000595083 291 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC005261.5-201ENST00000596280 355 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC092807.2-201ENST00000609367 243 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC090132.2-201ENST00000615881 347 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 AC009248.2-201ENST00000619826 254 ntBASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DNMT3BQ9UBC3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RNU6-283P-201ENST00000364788 107 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 DEFB109C-201ENST00000382575 264 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 DEFB109B-201ENST00000382656 264 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RNU6-741P-201ENST00000383889 107 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 SNORD70.1-201ENST00000391007 85 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AL139397.2-201ENST00000404529 772 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 SNORA11.2-201ENST00000408318 127 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 MTCO3P46-201ENST00000425787 232 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AL365400.1-201ENST00000431854 640 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RPS29P31-201ENST00000446147 164 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AC008264.1-201ENST00000447612 367 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RPS15AP27-201ENST00000449183 343 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 CCDC34P1-201ENST00000507441 517 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 PHBP14-201ENST00000512887 367 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RN7SKP83-201ENST00000516512 178 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RN7SKP289-201ENST00000517244 295 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 RPL7P20-201ENST00000520308 745 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AP006245.1-201ENST00000522549 120 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AL118558.2-201ENST00000556294 238 ntBASIC3.63□□□□□ -1.83
DNMT3BQ9UBC3 AC098826.3-201ENST00000603823 466 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms