Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NRBF2P5-201ENST00000603087 788 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AL391813.1-201ENST00000603098 260 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC135507.1-201ENST00000607214 561 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 ELL2P3-201ENST00000457883 1602 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 AC010329.5-201ENST00000623497 2174 ntBASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BLOC1S4Q9NUP1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC092593.1-201ENST00000515413 1815 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 RNU1-140P-201ENST00000365040 165 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 U3.26-201ENST00000391236 204 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 FO393413.1-201ENST00000402892 195 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 RN7SKP142-201ENST00000411236 328 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 RPL7P10-201ENST00000417407 739 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC009518.2-201ENST00000418056 731 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 ISCA1P6-201ENST00000427740 390 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC244505.4-201ENST00000434905 287 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AL161651.1-201ENST00000440882 223 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 SSXP5-201ENST00000443473 287 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 NANOGNBP1-201ENST00000448444 480 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AL441985.1-201ENST00000457727 251 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC080014.1-201ENST00000496877 1201 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC091965.2-201ENST00000512324 613 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 Y_RNA.688-201ENST00000516565 95 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 SCARNA13-201ENST00000516672 275 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 Y_RNA.695-201ENST00000516715 107 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-572P-201ENST00000516724 80 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 CYCSP39-201ENST00000565821 309 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC007938.3-201ENST00000604965 623 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC012409.4-201ENST00000612923 249 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC010338.1-201ENST00000621823 717 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 AC103710.2-202ENST00000641454 2853 ntBASIC3.17□□□□□ -1.9
BLOC1S4Q9NUP1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-179P-201ENST00000363350 107 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 Y_RNA.201-201ENST00000364052 96 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-169P-201ENST00000365336 107 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 RNU2-25P-201ENST00000411041 191 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC092809.3-201ENST00000415453 231 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 CALM2P2-201ENST00000428512 440 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AL078601.1-201ENST00000444542 271 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC003982.1-202ENST00000469928 248 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC126389.1-201ENST00000477436 290 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC009902.1-201ENST00000519351 183 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC025755.1-201ENST00000521306 278 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC022080.3-201ENST00000544433 482 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC107016.2-201ENST00000547968 190 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 LINC00933-203ENST00000559812 219 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC074050.1-201ENST00000563247 211 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC024153.1-201ENST00000603103 365 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC012119.1-201ENST00000603184 222 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 AC072046.2-201ENST00000618366 268 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 Z69908.1-201ENST00000622603 247 ntBASIC3.16□□□□□ -1.9
BLOC1S4Q9NUP1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
BLOC1S4Q9NUP1 RPL9P7-201ENST00000330965 580 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-1097P-201ENST00000363586 107 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 SNORA4.3-201ENST00000365564 137 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL356057.2-201ENST00000403318 432 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL590004.2-201ENST00000404787 371 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 RNU6-248P-201ENST00000410720 107 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 MTND3P17-201ENST00000416968 344 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 C1DP2-201ENST00000418167 426 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC022018.1-201ENST00000430685 241 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 GPR143P-201ENST00000434155 205 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 RPS20P5-201ENST00000434808 360 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 SETP8-201ENST00000435341 628 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 RPS15AP7-201ENST00000439294 405 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL022238.1-201ENST00000442557 355 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL135938.1-201ENST00000443141 297 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 GZMAP1-201ENST00000503054 631 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 AC116562.3-201ENST00000506136 177 ntBASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BLOC1S4Q9NUP1 HIGD1AP13-201ENST00000509878 289 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms