Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC002400.1-201ENST00000569310 726 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 MIR3921-201ENST00000577308 85 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 AL391813.2-201ENST00000609113 322 ntBASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
SMCO4Q9NRQ5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 MIR508-201ENST00000384857 115 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 MIR634-201ENST00000385208 97 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 MIR1290-201ENST00000408735 78 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 MTCO2P20-201ENST00000437339 673 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 BET1P1-201ENST00000482276 359 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 AC025465.3-201ENST00000510570 311 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 MIR3973-201ENST00000579824 107 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 AC009229.3-201ENST00000608056 282 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 AC008121.3-201ENST00000618726 433 ntBASIC0.37□□□□□ -2.35
SMCO4Q9NRQ5 SNORD18A-201ENST00000363753 72 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 CYCSP33-201ENST00000414485 327 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 YWHAZP8-201ENST00000436935 731 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 FDX1P2-201ENST00000450769 375 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 snoU13.15-201ENST00000459407 104 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC134050.1-201ENST00000495088 933 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 RNU6-197P-201ENST00000516680 100 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AP000403.1-201ENST00000603349 851 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC104763.2-201ENST00000604179 382 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC025588.3-201ENST00000604182 274 ntBASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
SMCO4Q9NRQ5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 RNA5SP240-201ENST00000365355 128 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 SNORA18.2-201ENST00000383865 132 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 MIR325-201ENST00000385260 98 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 RPL36P19-201ENST00000430744 301 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 TAAR7P-201ENST00000436141 242 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AL513124.1-201ENST00000450410 614 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 RNU6-113P-201ENST00000516653 101 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 BNIP3P16-201ENST00000589779 534 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AC090116.1-201ENST00000615679 446 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AC099654.5-201ENST00000636479 350 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 AC099063.3-201ENST00000642066 185 ntBASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.35□□□□□ -2.35
SMCO4Q9NRQ5 SNORA25B-201ENST00000365507 128 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 Y_RNA.500-201ENST00000384466 111 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 SNORA17.3-201ENST00000391159 129 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AL136133.1-201ENST00000413694 376 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 C1DP1-201ENST00000426049 402 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 MTCO1P44-201ENST00000441935 243 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AL137159.1-201ENST00000452808 512 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AC004812.1-201ENST00000540773 146 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AC133485.1-201ENST00000567176 124 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AC138907.6-201ENST00000568401 126 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AL158827.2-201ENST00000602494 330 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AC027335.2-201ENST00000624030 375 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AL691447.3-201ENST00000635020 330 ntBASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.34□□□□□ -2.36
SMCO4Q9NRQ5 AL049641.1-201ENST00000441055 1948 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 RNU6-1080P-201ENST00000383982 107 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 MIR608-201ENST00000384820 100 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 SNORA11.2-201ENST00000408318 127 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 RNA5SP501-201ENST00000410990 112 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 FCF1P6-201ENST00000456841 595 ntBASIC0.33□□□□□ -2.36
SMCO4Q9NRQ5 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms