Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.86□□□□□ -1.95
CHMP1AQ9HD42 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 RNU6-996P-201ENST00000365438 107 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 U8.11-201ENST00000384699 133 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 U8.12-201ENST00000384701 133 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 RNU6-903P-201ENST00000391270 109 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 MTCO1P21-201ENST00000416634 589 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 C8orf59P1-201ENST00000429930 303 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC098831.1-201ENST00000440661 216 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AL358232.1-201ENST00000448030 501 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC073415.1-201ENST00000449240 153 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AL590639.1-201ENST00000456484 337 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 U8.18-201ENST00000459285 133 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 BNIP3P30-201ENST00000601184 574 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AL138889.2-201ENST00000603883 242 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC012557.2-201ENST00000605919 418 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AL627309.6-201ENST00000606857 840 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AC013562.2-201ENST00000611632 603 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 AL354950.2-201ENST00000617939 290 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHMP1AQ9HD42 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC008669.1-201ENST00000565823 2178 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RNA5SP197-201ENST00000363357 119 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1085P-201ENST00000363576 107 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 Y_RNA.372-201ENST00000365599 102 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RNU6-1215P-201ENST00000384441 102 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RPL21P3-201ENST00000395517 478 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RNU2-49P-201ENST00000410666 184 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RN7SKP263-201ENST00000411194 309 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RPL32P35-201ENST00000415214 394 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AL353678.1-201ENST00000422735 741 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC007560.1-201ENST00000426912 237 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC004975.1-201ENST00000428733 208 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 CST9LP2-201ENST00000437612 320 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC016691.1-201ENST00000441321 413 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 HMGN2P10-201ENST00000448085 265 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC146507.2-201ENST00000460608 476 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 RNA5SP217-201ENST00000515959 91 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 Y_RNA.693-201ENST00000516641 110 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AK6P1-201ENST00000540219 478 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 NACAP3-201ENST00000552100 481 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC021739.1-201ENST00000559631 174 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AL451007.1-201ENST00000595491 289 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AL021997.1-201ENST00000605757 193 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 uc_338.11-201ENST00000619132 160 ntBASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CHMP1AQ9HD42 AC108206.1-201ENST00000570186 4159 ntBASIC2.84□□□□□ -1.96
CHMP1AQ9HD42 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.84□□□□□ -1.96
CHMP1AQ9HD42 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RNU6-552P-201ENST00000362869 119 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RNU1-105P-201ENST00000363470 161 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RNU2-29P-201ENST00000410423 189 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RNU4-46P-201ENST00000410818 138 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL592148.1-201ENST00000413568 445 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RPL21P90-201ENST00000415692 466 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL669831.1-202ENST00000428504 417 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 TIMM9P3-201ENST00000428659 274 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 RPL7P54-201ENST00000438336 674 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 GTF2IP13-201ENST00000438487 386 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AL078601.1-201ENST00000444542 271 ntBASIC2.83□□□□□ -1.96
CHMP1AQ9HD42 AC003071.1-201ENST00000451219 789 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms