Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC023632.4-201ENST00000517783 191 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC025281.1-201ENST00000567026 265 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 MIR4703-201ENST00000577728 79 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 MTATP6P3-201ENST00000581686 676 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 MIR4276-201ENST00000584832 70 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC008752.3-201ENST00000588113 712 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC007621.1-201ENST00000604544 437 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC004492.1-201ENST00000607036 742 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AP001330.5-201ENST00000607176 411 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AL157817.1-201ENST00000614264 790 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AL355365.1-201ENST00000616480 294 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 U6.99-201ENST00000637524 83 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC068137.3-201ENST00000639191 341 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 AC073869.6-201ENST00000640656 341 ntBASIC3.15□□□□□ -1.91
BRF2Q9HAW0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
BRF2Q9HAW0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 Z83843.1-201ENST00000604070 3685 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 NACAP2-201ENST00000318548 624 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.126-201ENST00000363382 111 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 RNA5SP50-201ENST00000363731 107 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.505-201ENST00000384489 102 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 RNU6-658P-201ENST00000384606 106 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 RNU6-550P-201ENST00000391057 101 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 PTMAP2-201ENST00000397627 327 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 RNU2-29P-201ENST00000410423 189 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 RNA5SP293-201ENST00000410527 113 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 RNU4-46P-201ENST00000410818 138 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.619-201ENST00000410951 90 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 BPY2DP-201ENST00000422208 265 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 MTCYBP5-201ENST00000423752 1135 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 SKA2P1-201ENST00000425592 390 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC091286.1-201ENST00000431233 461 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 GMFBP1-201ENST00000467831 427 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 SUMO2P6-201ENST00000505273 288 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC117522.3-201ENST00000507974 584 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC098591.2-201ENST00000510152 315 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 PSMA2P1-201ENST00000526365 646 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC104383.1-201ENST00000530297 370 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 HMGB1P33-201ENST00000563485 527 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 MIR3922-201ENST00000585192 84 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 U4.5-201ENST00000617137 123 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 AC034229.5-201ENST00000624258 185 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.14□□□□□ -1.91
BRF2Q9HAW0 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
BRF2Q9HAW0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 RNU6-517P-201ENST00000384362 110 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 RNU6-1158P-201ENST00000391167 107 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AL356967.1-201ENST00000406305 431 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 RNU6-193P-201ENST00000410977 107 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 FCF1P9-201ENST00000412546 282 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 UBE2V1P10-201ENST00000414685 269 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC096649.2-201ENST00000416186 393 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 MTCYBP8-201ENST00000422855 651 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC007560.1-201ENST00000426912 237 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 HMGN2P31-201ENST00000432430 273 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC005019.1-201ENST00000436455 431 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC009901.1-201ENST00000506703 541 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.693-201ENST00000516641 110 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 Y_RNA.704-201ENST00000516851 102 ntBASIC3.13□□□□□ -1.91
BRF2Q9HAW0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms