Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC008737.2-201ENST00000599446 118 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 AL162713.1-201ENST00000604480 262 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
EBF3Q9H4W6 Z83843.1-201ENST00000604070 3685 ntBASIC3.51□□□□□ -1.85
EBF3Q9H4W6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC004972.1-201ENST00000623934 2209 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU6-989P-201ENST00000362756 107 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNA5SP197-201ENST00000363357 119 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.133-201ENST00000363428 110 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.301-201ENST00000364990 103 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNA5SP167-201ENST00000365461 116 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU6-38P-201ENST00000384085 107 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU2-62P-201ENST00000410868 191 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU6-193P-201ENST00000410977 107 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU6-1304P-201ENST00000411374 106 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL451054.2-201ENST00000420896 202 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 ERLEC1P1-201ENST00000433806 578 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 FTH1P1-201ENST00000437933 532 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC006028.1-201ENST00000438379 402 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RPL23AP33-201ENST00000442301 452 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RAC1P7-201ENST00000445367 377 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC079781.2-201ENST00000446424 169 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU6-333P-201ENST00000459117 107 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC007547.1-201ENST00000462177 490 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC130509.1-201ENST00000464158 433 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 ST13P14-201ENST00000474095 734 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL049830.2-201ENST00000480072 201 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RPL21P13-201ENST00000488305 481 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC023141.12-201ENST00000512399 199 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC017037.2-201ENST00000513850 890 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU6-1170P-201ENST00000515974 106 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 RPL7P20-201ENST00000520308 745 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AP005435.4-201ENST00000529514 284 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 OR4P1P-201ENST00000530808 1136 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 OR5BN1P-201ENST00000532955 829 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 BNIP3P6-201ENST00000549284 499 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC006270.2-201ENST00000578523 652 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 COX6CP3-201ENST00000580869 223 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC067852.3-201ENST00000589177 561 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL669831.4-202ENST00000590817 238 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL080274.1-201ENST00000605565 220 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC084781.2-201ENST00000615568 161 ntBASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
EBF3Q9H4W6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNU1-75P-201ENST00000347264 129 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.111-201ENST00000363248 100 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNU5E-8P-201ENST00000363502 116 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.145-201ENST00000363527 102 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 Y_RNA.339-201ENST00000365325 102 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNU4-48P-201ENST00000365559 182 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNU6-907P-201ENST00000390924 102 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNA5SP293-201ENST00000410527 113 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 HMGN1P24-201ENST00000412282 298 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC113618.1-201ENST00000416747 285 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 OR4K11P-201ENST00000431829 904 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RPS20P5-201ENST00000434808 360 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 HMGB3P11-201ENST00000440127 604 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 DDX3P2-201ENST00000446138 111 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AL590399.6-201ENST00000446396 307 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC108059.3-201ENST00000456388 214 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNU7-66P-201ENST00000459469 62 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RPS27P29-201ENST00000463110 252 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 VN1R17P-201ENST00000472048 1090 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC090096.1-201ENST00000489168 390 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 KLHL2P1-201ENST00000508691 521 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 FAM206BP-201ENST00000510179 541 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNU4-29P-201ENST00000515943 174 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RNU6-559P-201ENST00000516151 98 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RN7SKP219-201ENST00000516825 296 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 SNORA25.17-201ENST00000517184 124 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 RN7SKP289-201ENST00000517244 295 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AP001804.3-201ENST00000525146 880 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 COPS8P3-201ENST00000526024 482 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.49□□□□□ -1.85
EBF3Q9H4W6 AL118558.2-201ENST00000556294 238 ntBASIC3.49□□□□□ -1.85
EBF3Q9H4W6 OR4K8P-201ENST00000578842 1048 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms