Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SFR1P2-201ENST00000421841 730 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 MTCO3P1-205ENST00000422088 832 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.64□□□□□ -2.15
TRIM4Q9C037 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM4Q9C037 AL590233.1-201ENST00000430017 456 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 MTND2P5-201ENST00000432656 1006 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 AL645568.3-201ENST00000433683 316 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 GTF2IP12-201ENST00000456547 356 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.64□□□□□ -2.15
TRIM4Q9C037 AC027575.1-201ENST00000481064 460 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 LTV1P1-201ENST00000510683 1237 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM4Q9C037 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.64□□□□□ -2.15
TRIM4Q9C037 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM4Q9C037 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 AL450270.1-201ENST00000606160 391 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 MIR502-201ENST00000606349 86 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM4Q9C037 MIR6515-201ENST00000619843 57 ntBASIC1.64□□□□□ -2.15
TRIM4Q9C037 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRIM4Q9C037 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 SNORD114-22-201ENST00000365423 72 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 CISD1P1-201ENST00000393907 327 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AL592310.1-201ENST00000414330 671 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 POLR2J4-204ENST00000418424 324 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 BPY2DP-201ENST00000422208 265 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 FAM204CP-201ENST00000424489 642 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 AL512661.1-201ENST00000434586 1253 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRIM4Q9C037 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 RPL21P47-201ENST00000483696 477 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC107032.1-201ENST00000485945 480 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 HMGB1P36-201ENST00000487709 576 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AL359212.1-201ENST00000556608 614 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC091946.2-201ENST00000606105 291 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.63□□□□□ -2.15
TRIM4Q9C037 AC104763.3-201ENST00000613765 618 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 ZNF702P-202ENST00000434269 1966 ntBASIC1.63□□□□□ -2.15
TRIM4Q9C037 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRIM4Q9C037 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM4Q9C037 RNA5SP276-201ENST00000362580 94 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 AC083799.1-201ENST00000366451 910 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 RNU6-19P-201ENST00000384718 107 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 RNU2-33P-201ENST00000410344 192 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 AC096920.1-201ENST00000423991 241 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 RPS3AP44-201ENST00000425466 790 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.62□□□□□ -2.15
TRIM4Q9C037 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM4Q9C037 SSXP1-201ENST00000453640 473 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 RNU7-140P-201ENST00000459546 60 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM4Q9C037 RNA5SP291-201ENST00000517222 105 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.62□□□□□ -2.15
TRIM4Q9C037 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.62□□□□□ -2.15
TRIM4Q9C037 AC105245.1-201ENST00000581934 244 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM4Q9C037 AL391813.1-201ENST00000603098 260 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 AC068276.1-201ENST00000605793 379 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 AC007038.2-201ENST00000608095 740 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 AL157834.3-201ENST00000615543 103 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 MTND1P37-201ENST00000636562 264 ntBASIC1.62□□□□□ -2.15
TRIM4Q9C037 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRIM4Q9C037 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRIM4Q9C037 AL033519.2-201ENST00000403958 392 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 POLHP1-201ENST00000411806 470 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM4Q9C037 AL357134.1-201ENST00000445848 426 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 RPL23AP6-201ENST00000446637 472 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 RNU1-123P-201ENST00000458950 160 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.61□□□□□ -2.15
TRIM4Q9C037 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.61□□□□□ -2.15
TRIM4Q9C037 AC008526.1-201ENST00000509149 338 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AF213884.2-201ENST00000510417 903 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AC007151.1-201ENST00000572774 483 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AC005951.2-201ENST00000576282 495 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AC103987.3-201ENST00000582071 292 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AL603758.1-201ENST00000618654 241 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AC091895.1-201ENST00000624494 256 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AP003400.5-201ENST00000624827 617 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.61□□□□□ -2.15
TRIM4Q9C037 OR4G1P-203ENST00000641984 1631 ntBASIC1.61□□□□□ -2.15
TRIM4Q9C037 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms