Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RPS24P7-201ENST00000416921 246 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AL449283.1-202ENST00000418249 604 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC005005.2-201ENST00000420779 380 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 PTGES3P4-201ENST00000426243 356 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC004383.1-201ENST00000438135 289 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 EEF1E1P1-201ENST00000446998 430 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 UBL5P3-201ENST00000475112 231 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 YWHAEP4-201ENST00000505390 198 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC079395.1-201ENST00000510981 262 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 RNU6-276P-201ENST00000516114 96 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 RNU6-703P-201ENST00000516946 107 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 RN7SKP258-201ENST00000517151 304 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 CBX3P7-201ENST00000532876 502 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 ANP32BP3-201ENST00000559213 706 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 NRBF2P1-201ENST00000587407 859 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 UBE2L4-201ENST00000587688 464 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AL606834.3-201ENST00000602615 496 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 MTCYBP22-201ENST00000603788 447 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 DPPA3P3-201ENST00000603842 430 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC103710.1-201ENST00000610003 901 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC245297.2-201ENST00000610119 565 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 U4atac.1-201ENST00000618345 95 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC109809.1-201ENST00000619665 545 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC024581.2-201ENST00000619986 252 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 SDR42E1P4-201ENST00000620894 481 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AL158801.5-201ENST00000623123 465 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 AC112204.3-201ENST00000623822 332 ntBASIC1.47□□□□□ -2.17
UPK3BQ9BT76 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
UPK3BQ9BT76 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 UBE2L2-201ENST00000254302 429 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 NACAP2-201ENST00000318548 624 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 RNU6-512P-201ENST00000364438 103 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 RNU6-621P-201ENST00000364752 109 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 SNORD116-12-201ENST00000384468 92 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 CIR1P3-201ENST00000405137 479 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 RNU4-26P-201ENST00000410270 107 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC104651.1-201ENST00000427559 735 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 HMGB1P27-201ENST00000431429 603 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 FABP5P15-201ENST00000453566 214 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 USP9YP10-201ENST00000454868 628 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 RNU7-59P-201ENST00000459101 61 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 snoU13.15-201ENST00000459407 104 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 snoU13.26-201ENST00000459452 105 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AP001324.2-201ENST00000461163 319 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 MRPS33P3-201ENST00000513456 322 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 RNU1-40P-201ENST00000516816 164 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 RNU1-97P-201ENST00000516872 164 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AP000873.5-201ENST00000533906 236 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 MIR3935-201ENST00000583472 104 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 BNIP3P27-201ENST00000599991 412 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC021171.1-201ENST00000603137 706 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AL138963.2-201ENST00000605137 226 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC007038.2-201ENST00000608095 740 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC131235.4-201ENST00000609288 620 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC116618.1-201ENST00000634617 774 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC110994.2-201ENST00000635481 492 ntBASIC1.46□□□□□ -2.18
UPK3BQ9BT76 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.46□□□□□ -2.18
UPK3BQ9BT76 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 SNORD114-1-201ENST00000362705 72 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 RNU6-777P-201ENST00000364265 104 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 OR5H15-201ENST00000383696 930 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AL139397.2-201ENST00000404529 772 ntBASIC1.45□□□□□ -2.18
UPK3BQ9BT76 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3BQ9BT76 AL359704.1-201ENST00000411586 781 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms