Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 BTF3P12-201ENST00000519620 469 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 NDUFB9P3-201ENST00000521269 501 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.29□□□□□ -1.88
NPAS1Q99742 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS1Q99742 AC011602.1-201ENST00000546484 331 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 MIR3158-1-201ENST00000583596 81 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 MIR4424-201ENST00000585257 86 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 AC012119.1-201ENST00000603184 222 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 AL035413.2-201ENST00000604801 525 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NPAS1Q99742 AP003400.5-201ENST00000624827 617 ntBASIC3.29□□□□□ -1.88
NPAS1Q99742 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.29□□□□□ -1.88
NPAS1Q99742 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS1Q99742 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS1Q99742 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPAS1Q99742 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.28□□□□□ -1.88
NPAS1Q99742 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.28□□□□□ -1.88
NPAS1Q99742 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.28□□□□□ -1.88
NPAS1Q99742 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 RNU6-1035P-201ENST00000384477 107 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 MIR578-201ENST00000384828 96 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 POLHP1-201ENST00000411806 470 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC022028.1-201ENST00000412054 408 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 RPL21P111-201ENST00000418453 477 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 TOMM20P4-201ENST00000427861 435 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC091286.1-201ENST00000431233 461 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.28□□□□□ -1.88
NPAS1Q99742 snoU13.28-201ENST00000459235 104 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AP002884.2-201ENST00000471647 395 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS1Q99742 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS1Q99742 AC025755.1-201ENST00000521306 278 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC023050.3-201ENST00000541142 333 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 MIR1254-2-201ENST00000579553 63 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC018638.8-201ENST00000588755 281 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 ATP1B3P1-201ENST00000605365 821 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC092807.2-201ENST00000609367 243 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 FTX_3.1-201ENST00000610451 147 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 DUSP12P1-201ENST00000612874 516 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC063943.3-201ENST00000615562 356 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC006133.1-201ENST00000617106 264 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.28□□□□□ -1.88
NPAS1Q99742 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.28□□□□□ -1.88
NPAS1Q99742 AC090617.10-201ENST00000624308 134 ntBASIC3.28□□□□□ -1.88
NPAS1Q99742 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NPAS1Q99742 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPAS1Q99742 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.89
NPAS1Q99742 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS1Q99742 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
NPAS1Q99742 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS1Q99742 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.27□□□□□ -1.89
NPAS1Q99742 CBX3P1-201ENST00000325243 554 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 RNU6-884P-201ENST00000363889 107 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 RNU6-371P-201ENST00000364283 108 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NPAS1Q99742 SNORA16.2-201ENST00000390991 127 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AL391417.1-201ENST00000404100 426 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 BX682237.1-201ENST00000415016 335 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS1Q99742 AL645937.1-202ENST00000421799 937 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 HMGN2P30-201ENST00000423237 256 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.27□□□□□ -1.89
NPAS1Q99742 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.27□□□□□ -1.89
NPAS1Q99742 SRIP2-201ENST00000428470 166 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC098614.3-201ENST00000438957 440 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 RPL7P12-201ENST00000446719 750 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.27□□□□□ -1.89
NPAS1Q99742 AC012181.1-201ENST00000479895 423 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC083904.1-201ENST00000487828 231 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 HMGB1P30-201ENST00000492455 606 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 Y_RNA.654-201ENST00000497848 106 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC008628.2-201ENST00000502605 298 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC009901.1-201ENST00000506703 541 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 CCDC34P1-201ENST00000507441 517 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 HIGD1AP13-201ENST00000509878 289 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.27□□□□□ -1.89
NPAS1Q99742 AC010486.1-201ENST00000511793 424 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC112206.3-201ENST00000514578 389 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 RNU2-69P-201ENST00000516061 100 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 RNU6-189P-201ENST00000516120 101 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.27□□□□□ -1.89
NPAS1Q99742 AP003122.3-201ENST00000526316 255 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC084851.1-201ENST00000529105 249 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NPAS1Q99742 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AC099778.2-201ENST00000610904 211 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 PLCE1P1-201ENST00000622094 305 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 DUXAP9-208ENST00000622815 614 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 AL034408.1-202ENST00000636088 415 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.27□□□□□ -1.89
NPAS1Q99742 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms