Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-933P-201ENST00000384424 107 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.577-201ENST00000384794 101 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 RNA5SP56-201ENST00000410277 118 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 ELOCP18-201ENST00000434209 337 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 CHEK2P4-201ENST00000450340 246 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 MTND3P25-201ENST00000509243 135 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 ACA59.1-201ENST00000515966 143 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 AC008489.1-201ENST00000524271 483 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 AC126177.3-201ENST00000551839 688 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 RPL23AP87-202ENST00000573039 466 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 RN7SL703P-201ENST00000578485 302 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 AC005000.2-201ENST00000605468 310 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 AC096772.1-201ENST00000609146 564 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 MIR6875-201ENST00000617506 72 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 AC008669.1-201ENST00000565823 2178 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 RLIMP1-201ENST00000339626 1680 ntBASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SYNGAP1Q96PV0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.376-201ENST00000365638 108 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-14P-201ENST00000384630 106 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 MIR548I3-201ENST00000408378 149 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 MIR548I1-201ENST00000408810 149 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 ELOCP20-201ENST00000422460 345 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 FO393415.2-201ENST00000480085 343 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 SNORA40.14-201ENST00000516543 86 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-570P-201ENST00000517051 105 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 CBX3P8-201ENST00000532412 525 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 U73479.1-201ENST00000618062 168 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AC141273.2-201ENST00000618989 130 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AL031601.2-202ENST00000622650 282 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 SAGE4P-201ENST00000442271 3381 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AC005332.5-201ENST00000591222 2919 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 MTND5P6-201ENST00000422338 1798 ntBASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SYNGAP1Q96PV0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 NOL8P1-201ENST00000508336 3529 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 RNU1-108P-201ENST00000362556 161 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 RNY1P16-201ENST00000363063 111 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 RNU4-42P-201ENST00000364738 142 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 RNU2-43P-201ENST00000410306 190 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 AL133396.1-201ENST00000432048 687 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 AC073063.1-201ENST00000434352 607 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 RPL23AP33-201ENST00000442301 452 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 RPS3AP46-201ENST00000448352 682 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 HMGB3P17-201ENST00000504195 649 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 VN1R104P-201ENST00000505115 1009 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.673-201ENST00000516306 88 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 MIR4512-201ENST00000583257 77 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 HMGB1P50-201ENST00000605814 607 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 MIR1244-1-201ENST00000612829 85 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 MIR1244-3-201ENST00000635744 85 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 MIR1244-2-201ENST00000636449 85 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 MIR1244-4-202ENST00000636813 85 ntBASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SYNGAP1Q96PV0 ZNF285B-201ENST00000561698 1767 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.14-201ENST00000362415 103 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.19-201ENST00000362462 99 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.26-201ENST00000362539 101 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 Y_RNA.214-201ENST00000364201 112 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-371P-201ENST00000364283 108 ntBASIC4.8□□□□□ -1.64
SYNGAP1Q96PV0 RNU6-806P-201ENST00000365147 105 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms