Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-575P-201ENST00000411326 105 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 TOMM22P2-201ENST00000430735 237 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 MTND2P5-201ENST00000432656 1006 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 ZNF680P1-201ENST00000436625 1469 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 SNRPEP9-201ENST00000436794 238 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 HMGB1P18-201ENST00000438801 619 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 PTGES3P1-201ENST00000439531 483 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AL161651.1-201ENST00000440882 223 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 MTCO1P53-201ENST00000441633 699 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 VN1R10P-201ENST00000447106 875 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 FCF1P6-201ENST00000456841 595 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AC093677.1-201ENST00000514414 678 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 RNA5SP61-201ENST00000516453 100 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AC103833.1-201ENST00000517442 172 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.02□□□□□ -2.25
AP1S3Q96PC3 SNRPGP17-201ENST00000603780 214 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AC010900.2-201ENST00000604508 210 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 AF129408.1-201ENST00000608767 431 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 MIR7843-201ENST00000622274 79 ntBASIC1.02□□□□□ -2.25
AP1S3Q96PC3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 U8.1-201ENST00000362843 134 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 RNU1-23P-201ENST00000363361 144 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 SNORD56.4-201ENST00000363883 71 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 RNU6-203P-201ENST00000384038 104 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC097463.2-201ENST00000421074 142 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 SFR1P2-201ENST00000421841 730 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 RPL7P34-201ENST00000433316 712 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AL691517.1-201ENST00000440833 1235 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 MOB1AP2-201ENST00000446060 614 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 COX6CP18-201ENST00000448769 222 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC005908.1-201ENST00000468701 347 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 UBL5P3-201ENST00000475112 231 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 RPS15AP36-201ENST00000492022 382 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 RNU6-295P-201ENST00000516901 104 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 CYB5AP5-201ENST00000549779 389 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC090079.2-201ENST00000575289 768 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC011494.1-201ENST00000596454 237 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AC091946.2-201ENST00000606105 291 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 AL109620.1-201ENST00000618738 1197 ntBASIC1.01□□□□□ -2.25
AP1S3Q96PC3 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
AP1S3Q96PC3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1□□□□□ -2.25
AP1S3Q96PC3 AC002543.1-201ENST00000299783 1954 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1□□□□□ -2.25
AP1S3Q96PC3 SNRPEP2-201ENST00000397592 279 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 CCNG1P1-201ENST00000406783 885 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AL133264.1-201ENST00000407157 562 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 RNU2-28P-201ENST00000410457 189 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1□□□□□ -2.25
AP1S3Q96PC3 AC002381.1-201ENST00000447049 280 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1□□□□□ -2.25
AP1S3Q96PC3 AL590365.1-201ENST00000450788 243 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1□□□□□ -2.25
AP1S3Q96PC3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1□□□□□ -2.25
AP1S3Q96PC3 AC013828.1-201ENST00000481845 158 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 RPL22P13-201ENST00000493291 347 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 MTCO2P15-201ENST00000532655 656 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AP003034.1-201ENST00000534621 422 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC135279.1-201ENST00000543493 504 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1□□□□□ -2.25
AP1S3Q96PC3 MIR3683-201ENST00000580847 82 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC004805.2-201ENST00000605382 482 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC092953.2-201ENST00000608000 699 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC239868.4-201ENST00000608318 671 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1□□□□□ -2.25
AP1S3Q96PC3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1□□□□□ -2.25
AP1S3Q96PC3 AC087821.2-201ENST00000637086 450 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1□□□□□ -2.25
AP1S3Q96PC3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1□□□□□ -2.25
AP1S3Q96PC3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1□□□□□ -2.25
AP1S3Q96PC3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
AP1S3Q96PC3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
AP1S3Q96PC3 RNU1-78P-201ENST00000391248 165 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 RNA5SP501-201ENST00000410990 112 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 AC078974.1-201ENST00000411597 223 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 RPL26P27-201ENST00000414397 437 ntBASIC0.99□□□□□ -2.25
AP1S3Q96PC3 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms