Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SCARNA17.1-201ENST00000516211 143 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 SCARNA17.2-201ENST00000516334 143 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 SNRPGP18-201ENST00000553000 214 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 DEFB122-202ENST00000569013 197 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 LRRC37A5P-203ENST00000580181 585 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 AP000403.1-201ENST00000603349 851 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
COL21A1Q96P44 AL589743.7-201ENST00000612637 233 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 SCARNA17.4-201ENST00000614296 143 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AL136981.2-201ENST00000617319 734 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC022960.3-201ENST00000619794 441 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC009831.4-201ENST00000620744 325 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 MIR6873-201ENST00000622788 63 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 OR4G3P-201ENST00000633500 913 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 AC004520.1-201ENST00000608362 1413 ntBASIC2.05□□□□□ -2.08
COL21A1Q96P44 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL21A1Q96P44 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.05□□□□□ -2.08
COL21A1Q96P44 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 RNU6-482P-201ENST00000391068 107 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 HMGB1P11-201ENST00000413899 637 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 MTCO2P23-201ENST00000425216 680 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 ISCA1P1-201ENST00000426679 387 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 HMGB1P27-201ENST00000431429 603 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 MTCO2P20-201ENST00000437339 673 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC104058.1-201ENST00000448028 297 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 RPL23AP35-201ENST00000451906 501 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 TRBV1-201ENST00000476502 284 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 RPS29P20-201ENST00000489592 171 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 TPT1P8-201ENST00000510120 555 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC008549.1-201ENST00000512900 643 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 RNU6-548P-201ENST00000517083 115 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
COL21A1Q96P44 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC015712.3-201ENST00000559380 164 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 MIR4658-201ENST00000584344 65 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC025754.2-201ENST00000606491 432 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC080013.3-201ENST00000606839 578 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 RNU4-5P-201ENST00000607255 135 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AL157392.4-201ENST00000609756 345 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 uc_338.14-201ENST00000613162 166 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC068057.2-201ENST00000624047 895 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 AC091965.5-201ENST00000624785 342 ntBASIC2.04□□□□□ -2.08
COL21A1Q96P44 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.04□□□□□ -2.08
COL21A1Q96P44 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL596028.1-201ENST00000326971 197 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 SNORA38-201ENST00000363946 132 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 RNU5A-8P-201ENST00000364102 114 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
COL21A1Q96P44 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC106883.1-201ENST00000418805 562 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 MTCO3P30-201ENST00000426425 670 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 GPM6BP2-201ENST00000432046 144 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 GPM6BP1-201ENST00000446387 144 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 PTENP1-201ENST00000447117 1215 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 FABP5P15-201ENST00000453566 214 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC080013.2-201ENST00000460866 323 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC109486.1-201ENST00000486833 374 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 UBE2V1P12-201ENST00000503954 474 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 SNORA31.3-201ENST00000516029 96 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.03□□□□□ -2.08
COL21A1Q96P44 AC026464.5-201ENST00000562497 722 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms