Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.98□□□□□ -1.77
CHFRQ96EP1 MIR3128-201ENST00000581957 66 ntBASIC3.98□□□□□ -1.77
CHFRQ96EP1 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.98□□□□□ -1.77
CHFRQ96EP1 AC103710.2-201ENST00000609912 942 ntBASIC3.98□□□□□ -1.77
CHFRQ96EP1 AC019176.2-201ENST00000611579 315 ntBASIC3.98□□□□□ -1.77
CHFRQ96EP1 AL391261.4-201ENST00000616012 481 ntBASIC3.98□□□□□ -1.77
CHFRQ96EP1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.98□□□□□ -1.77
CHFRQ96EP1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.98□□□□□ -1.77
CHFRQ96EP1 U6.98-201ENST00000637157 84 ntBASIC3.98□□□□□ -1.77
CHFRQ96EP1 AC107081.3-201ENST00000612715 2034 ntBASIC3.98□□□□□ -1.77
CHFRQ96EP1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.98□□□□□ -1.77
CHFRQ96EP1 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.98□□□□□ -1.77
CHFRQ96EP1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHFRQ96EP1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHFRQ96EP1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHFRQ96EP1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 RNU6-770P-201ENST00000363929 105 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 Y_RNA.288-201ENST00000364854 92 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 Y_RNA.350-201ENST00000365409 98 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 Y_RNA.473-201ENST00000384333 102 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 SNORA75.6-201ENST00000391318 127 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 NDUFS5P1-201ENST00000405668 289 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AL035423.1-201ENST00000420331 213 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC244098.2-201ENST00000422068 99 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 DYNLT3P2-201ENST00000442517 295 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 RANP8-201ENST00000444720 713 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 RPL21P11-201ENST00000461458 483 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 RNU6-120P-201ENST00000516077 103 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 MTND4P7-201ENST00000523876 130 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 SRGNP1-201ENST00000603392 451 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 RNU1-30P-201ENST00000606575 163 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 DUSP12P1-201ENST00000612874 516 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AC084757.4-201ENST00000616350 526 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 AL355365.1-201ENST00000616480 294 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 U6.105-201ENST00000637379 88 ntBASIC3.97□□□□□ -1.77
CHFRQ96EP1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHFRQ96EP1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHFRQ96EP1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHFRQ96EP1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.97□□□□□ -1.77
CHFRQ96EP1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CHFRQ96EP1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CHFRQ96EP1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHFRQ96EP1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 SNORD3E-201ENST00000362899 217 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RNU6-335P-201ENST00000364563 113 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 MT-TW-201ENST00000387382 68 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RNU2-71P-201ENST00000411395 189 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RPL7AP73-201ENST00000413490 353 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RPL23AP83-201ENST00000434984 473 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 TIMM9P1-201ENST00000436122 256 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RPS26P56-201ENST00000444468 240 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AL590664.1-201ENST00000448065 339 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 SNORD127-201ENST00000458892 86 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 PABPC1P3-201ENST00000469174 459 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RPL23AP41-201ENST00000484754 458 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RPS26P15-201ENST00000488067 348 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC020893.1-201ENST00000502452 580 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC110768.1-201ENST00000509222 400 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC104619.4-201ENST00000510773 249 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 RNU6-470P-201ENST00000515954 104 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 GNAI2P1-201ENST00000541815 315 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 RPL21P12-201ENST00000559810 515 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC125232.2-201ENST00000592457 143 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.96□□□□□ -1.78
CHFRQ96EP1 AL138726.1-201ENST00000614873 333 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC015967.1-201ENST00000619893 476 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHFRQ96EP1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHFRQ96EP1 MTND5P7-201ENST00000413558 1798 ntBASIC3.96□□□□□ -1.78
CHFRQ96EP1 AC010615.1-201ENST00000594254 1764 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms