Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC021739.1-201ENST00000559631 174 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 DPPA3P3-201ENST00000603842 430 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 RNU4-5P-201ENST00000607255 135 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.15-201ENST00000611544 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.16-201ENST00000613119 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.12-201ENST00000613778 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.20-201ENST00000613956 192 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.9-201ENST00000615427 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.11-201ENST00000616345 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.2-201ENST00000616535 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.3-201ENST00000617785 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.19-201ENST00000618602 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 RNU2-1-201ENST00000618664 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.6-201ENST00000619225 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.5-201ENST00000619465 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 U2.10-201ENST00000620268 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
ECHDC3Q96DC8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
ECHDC3Q96DC8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.09□□□□□ -2.08
ECHDC3Q96DC8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
ECHDC3Q96DC8 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 RNU6-433P-201ENST00000363216 104 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 RNU4-26P-201ENST00000410270 107 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 RNU2-68P-201ENST00000410878 191 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AL139156.1-201ENST00000412785 841 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AC106872.3-201ENST00000495104 446 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 RPF2P2-201ENST00000504693 896 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 RNU6-64P-201ENST00000517119 105 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AC005261.5-201ENST00000596280 355 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AL021997.1-201ENST00000605757 193 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AC097468.3-201ENST00000607956 456 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AL161423.1-201ENST00000613700 262 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 MIR7157-201ENST00000635801 60 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 MTND4P9-201ENST00000507819 1346 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 AC104454.1-201ENST00000421341 1401 ntBASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ECHDC3Q96DC8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 SNORA4.1-201ENST00000364263 144 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 RNU6-769P-201ENST00000384407 104 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 BTF3L4P3-201ENST00000418879 476 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AL031659.1-201ENST00000447075 539 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC080013.2-201ENST00000460866 323 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC092436.1-201ENST00000506450 503 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC093281.2-201ENST00000510153 597 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 SCARNA3-201ENST00000517097 143 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC024619.4-201ENST00000580924 316 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC091152.3-201ENST00000604227 325 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AL157392.4-201ENST00000609756 345 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AP002791.1-201ENST00000623291 381 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 MIR3199-2-201ENST00000636243 86 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 AC009487.4-201ENST00000624969 3585 ntBASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ECHDC3Q96DC8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 RNU6-1284P-201ENST00000363701 100 ntBASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 RNU6-188P-201ENST00000364207 107 ntBASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 RNU6-723P-201ENST00000383973 107 ntBASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 RNU6-14P-201ENST00000384630 106 ntBASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 AC092648.1-201ENST00000425870 423 ntBASIC2.06□□□□□ -2.08
ECHDC3Q96DC8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms