Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC087481.2-201ENST00000565492 330 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 MIR3122-201ENST00000577243 73 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC013468.1-201ENST00000608680 598 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 OR4G3P-201ENST00000633500 913 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AL442644.1-201ENST00000454390 3105 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TTC28Q96AY4 Y_RNA.228-201ENST00000364346 98 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 RNU6-452P-201ENST00000384406 107 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC010385.1-201ENST00000412374 256 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 SNX3P1X-201ENST00000414887 175 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 MTND2P19-201ENST00000449129 1012 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC015908.1-201ENST00000478739 476 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 EIF4EP3-201ENST00000498782 656 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC121161.1-201ENST00000510606 652 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 RNU6-758P-201ENST00000516292 89 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC068880.5-201ENST00000624331 290 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.81□□□□□ -2.28
TTC28Q96AY4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TTC28Q96AY4 MTND5P31-201ENST00000419366 1374 ntBASIC0.81□□□□□ -2.28
TTC28Q96AY4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TTC28Q96AY4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TTC28Q96AY4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 RNU6-712P-201ENST00000410558 100 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 MTND5P25-201ENST00000430499 799 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 RNU7-26P-201ENST00000458980 63 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 snoU13.28-201ENST00000459235 104 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 NAP1L1P3-201ENST00000462291 880 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 SNORA48.11-201ENST00000517015 89 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC087808.1-201ENST00000520501 361 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 EIF4A1P12-201ENST00000551910 141 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC093788.1-201ENST00000609356 927 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AL391597.1-201ENST00000618707 694 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TTC28Q96AY4 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 RNU6-1072P-201ENST00000384703 107 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 RNU6-443P-201ENST00000384780 107 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 RPP40P1-201ENST00000426762 456 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 FO393419.3-201ENST00000428741 282 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 UBE2FP3-201ENST00000436366 524 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC097499.1-201ENST00000444277 208 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 BX248409.1-201ENST00000455497 255 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC098591.2-201ENST00000510152 315 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC024405.2-202ENST00000532731 184 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC005332.10-201ENST00000612725 619 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.8□□□□□ -2.28
TTC28Q96AY4 AC097372.4-201ENST00000625025 466 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.8□□□□□ -2.28
TTC28Q96AY4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TTC28Q96AY4 Y_RNA.18-201ENST00000362461 102 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TTC28Q96AY4 MT-TC-201ENST00000387405 66 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 RNA5SP56-201ENST00000410277 118 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 RNA5SP118-201ENST00000410385 109 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 RNU4-78P-201ENST00000410940 126 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 ARF4P4-201ENST00000439608 520 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 PTENP1-201ENST00000447117 1215 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 ATG12P2-201ENST00000456830 416 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 RPS20P20-201ENST00000460498 340 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC018437.1-201ENST00000492214 406 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 SUMO1P1-201ENST00000497904 306 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 XIAPP1-201ENST00000603162 600 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AP001330.4-201ENST00000604350 154 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AP000654.2-201ENST00000605633 586 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC242628.1-201ENST00000606810 391 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC090116.1-201ENST00000615679 446 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC095031.1-201ENST00000623685 672 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 RNU6-1249P-201ENST00000363237 111 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AL513475.1-201ENST00000406602 315 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC024082.2-201ENST00000434771 238 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 AL161788.1-201ENST00000441805 169 ntBASIC0.79□□□□□ -2.28
TTC28Q96AY4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.79□□□□□ -2.28
TTC28Q96AY4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms