Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 Z82210.1-201ENST00000440037 231 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-CQ95604 AL354714.3-201ENST00000447284 493 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-CQ95604 RPL23AP3-201ENST00000453844 468 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 RPL12P39-201ENST00000455456 496 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-CQ95604 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-CQ95604 AC006065.5-201ENST00000623427 349 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
HLA-CQ95604 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HLA-CQ95604 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 AC125336.1-201ENST00000508893 2827 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-CQ95604 ASNSP1-201ENST00000518311 1939 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
HLA-CQ95604 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-CQ95604 A2MP1-204ENST00000566278 4130 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-CQ95604 FTLP6-201ENST00000355274 422 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 RNU6-1272P-201ENST00000362776 107 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 SNORA72.2-201ENST00000365028 127 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 OR1L6-202ENST00000373684 1044 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 MIR134-201ENST00000385258 73 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 RNU6-239P-201ENST00000390990 99 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-CQ95604 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-CQ95604 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-CQ95604 SNORD125-201ENST00000459538 96 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AC020890.1-201ENST00000491837 504 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AC097462.2-201ENST00000504623 481 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-CQ95604 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-CQ95604 LINC00933-203ENST00000559812 219 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 UBL5P4-201ENST00000562584 236 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 CYCSP39-201ENST00000565821 309 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 MIR548X2-201ENST00000579776 100 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AC053481.4-201ENST00000583164 216 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 VN1R85P-201ENST00000601587 426 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AC136601.2-201ENST00000604356 474 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AC023043.4-201ENST00000612081 449 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AC048347.1-201ENST00000624621 427 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 SNORA43.4-201ENST00000629559 138 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-CQ95604 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-CQ95604 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-CQ95604 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-CQ95604 AC092593.1-201ENST00000515413 1815 ntBASIC5.32□□□□□ -1.56
HLA-CQ95604 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-CQ95604 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-CQ95604 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-CQ95604 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-CQ95604 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 AC005725.1-201ENST00000577346 2607 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 AC011504.1-201ENST00000623331 4103 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 AC010332.2-201ENST00000613083 1904 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 RNA5SP447-201ENST00000363749 119 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 U3.19-201ENST00000390893 196 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 RPS26P42-201ENST00000413485 326 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 AL035461.1-201ENST00000421490 332 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 AC244098.2-201ENST00000422068 99 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 AL732292.1-201ENST00000426692 226 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 SEPT7P4-201ENST00000437076 306 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 AC009237.7-201ENST00000447357 229 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 BTF3P6-201ENST00000448054 499 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 MTATP6P7-201ENST00000453315 681 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 AC016632.1-201ENST00000503994 196 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.31□□□□□ -1.56
HLA-CQ95604 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 MIR4458-201ENST00000578872 75 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-CQ95604 AL359881.1-201ENST00000602916 267 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 MIR6853-201ENST00000619642 74 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 AC011944.2-201ENST00000624440 683 ntBASIC5.31□□□□□ -1.56
HLA-CQ95604 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-CQ95604 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-CQ95604 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
HLA-CQ95604 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-CQ95604 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-CQ95604 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms