Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AP002826.1-201ENST00000608835 315 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC107294.1-201ENST00000609524 467 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 AC022418.1-201ENST00000624118 445 ntBASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4AQ8WYN0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 UBE2L2-201ENST00000254302 429 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 MIR607-201ENST00000385241 96 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AL356057.2-201ENST00000403318 432 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 NDUFB4P7-201ENST00000423198 363 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AC091390.3-201ENST00000426478 338 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 SAR1AP4-201ENST00000429225 591 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 RPL21P41-201ENST00000459863 264 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 RPS20P22-201ENST00000473700 357 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 RPL7P43-201ENST00000478876 753 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 SNORA14.1-201ENST00000516113 141 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 RNU6-1153P-201ENST00000516760 105 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 RNU6-273P-201ENST00000516937 96 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 MIR3941-201ENST00000582572 103 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 POLR3GP2-201ENST00000588366 668 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4AQ8WYN0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ATG4AQ8WYN0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
ATG4AQ8WYN0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ATG4AQ8WYN0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.212-201ENST00000364177 102 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AL445189.1-201ENST00000405722 338 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 MIR548K-201ENST00000408406 116 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 RPL27AP8-201ENST00000424277 446 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AL451062.2-201ENST00000427515 271 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AP000907.1-201ENST00000428428 510 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AL356867.1-201ENST00000429623 299 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC236972.2-201ENST00000434979 310 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC005019.1-201ENST00000436455 431 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 HSPD1P21-201ENST00000436541 245 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AP000926.1-201ENST00000479573 241 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 RPL31P13-201ENST00000484151 370 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC023141.12-201ENST00000512399 199 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 FTH1P9-201ENST00000513251 355 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 RNU6-566P-201ENST00000516790 107 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 RNA5SP471-201ENST00000516971 106 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 SNORA25.17-201ENST00000517184 124 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC006270.2-201ENST00000578523 652 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 MIR3672-201ENST00000584290 82 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 AC023043.2-201ENST00000589678 1026 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4AQ8WYN0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AC058791.1-201ENST00000608412 3198 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 Y_RNA.419-201ENST00000384041 102 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 RNU6-45P-201ENST00000384471 107 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 MIR548F5-201ENST00000408421 86 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 Z85995.1-201ENST00000415547 335 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AL035423.1-201ENST00000420331 213 ntBASIC3.57□□□□□ -1.84
ATG4AQ8WYN0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms