Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC022493.1-201ENST00000492984 337 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AC079395.1-201ENST00000510981 262 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 SNORA19.3-201ENST00000516165 130 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AC091163.3-201ENST00000518269 1144 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LMX1AQ8TE12 ANP32BP3-201ENST00000559213 706 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 MIR4448-201ENST00000584360 86 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AC009268.2-201ENST00000621925 457 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 AC092447.10-201ENST00000620607 1652 ntBASIC1.69□□□□□ -2.14
LMX1AQ8TE12 Y_RNA.164-201ENST00000363709 102 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 RNU6-1083P-201ENST00000384022 107 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AL590084.2-201ENST00000401481 382 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 U3.40-201ENST00000408706 208 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AC023141.4-201ENST00000412031 328 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AL449283.1-202ENST00000418249 604 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AL451054.2-201ENST00000420896 202 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 ZNF863P-201ENST00000426746 417 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 RPS15AP5-201ENST00000436276 388 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AC021146.8-201ENST00000507455 733 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AP005902.1-201ENST00000521358 186 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AL512347.1-201ENST00000566420 503 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 SNORD14A-201ENST00000606526 91 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 snoU13.31-201ENST00000607291 104 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.68□□□□□ -2.14
LMX1AQ8TE12 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 DUXAP9-208ENST00000622815 614 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 MIR7157-201ENST00000635801 60 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 MTND4P23-201ENST00000447723 1363 ntBASIC1.68□□□□□ -2.14
LMX1AQ8TE12 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 MIR337-201ENST00000362281 93 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 RNU6-97P-201ENST00000363387 104 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 SNORA3A-201ENST00000364113 130 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 Y_RNA.311-201ENST00000365068 96 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 U8.10-201ENST00000384260 133 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 RNU6-114P-201ENST00000384704 105 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 SNORA67.5-201ENST00000391036 107 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AL021407.1-201ENST00000404531 386 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 CCNG1P1-201ENST00000406783 885 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 MTCYBP38-201ENST00000417160 1123 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AL358453.1-201ENST00000422522 250 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 GPM6BP3-201ENST00000442797 145 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 PSPHP1-201ENST00000450062 261 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 MTATP6P7-201ENST00000453315 681 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 MTND2P24-201ENST00000453434 806 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 SSXP1-201ENST00000453640 473 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 USP9YP10-201ENST00000454868 628 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC104563.1-201ENST00000476147 376 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 HMGB1P36-201ENST00000487709 576 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 RNU6-276P-201ENST00000516114 96 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 RNA5SP291-201ENST00000517222 105 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC021451.1-201ENST00000523498 1129 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC090079.2-201ENST00000575289 768 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 MIR5571-201ENST00000577998 113 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 BBIP1P1-201ENST00000602999 279 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC004987.4-201ENST00000603383 338 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AL031601.2-202ENST00000622650 282 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AP002371.2-201ENST00000624450 503 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AP003400.5-201ENST00000624827 617 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 AC019226.1-201ENST00000625666 515 ntBASIC1.67□□□□□ -2.14
LMX1AQ8TE12 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LMX1AQ8TE12 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 RNU6-661P-201ENST00000362409 107 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 RNU1-39P-201ENST00000383897 165 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 RNU6-413P-201ENST00000384115 107 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 RNU6-140P-201ENST00000384566 108 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AL136310.1-201ENST00000404926 654 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 MIR1284-201ENST00000408337 120 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 RNU4-62P-201ENST00000410125 130 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 RNA5SP270-201ENST00000411361 118 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 HMGB1P27-201ENST00000431429 603 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AC007327.1-201ENST00000447461 264 ntBASIC1.66□□□□□ -2.14
LMX1AQ8TE12 AC096571.1-202ENST00000506634 735 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms