Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC135721.1-201ENST00000497954 479 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 FAM206BP-201ENST00000510179 541 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 FTH1P9-201ENST00000513251 355 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU7-51P-201ENST00000516560 62 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU6-798P-201ENST00000516912 103 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNU6-64P-201ENST00000517119 105 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC022790.1-201ENST00000522872 204 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC068446.3-201ENST00000555285 382 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC024619.4-201ENST00000580924 316 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AL133255.1-201ENST00000606374 441 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC006329.2-201ENST00000611491 394 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 AC093913.1-201ENST00000614178 329 ntBASIC3.21□□□□□ -1.9
LMO3Q8TAP4 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
LMO3Q8TAP4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 MTND5P19-201ENST00000424872 1794 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 PABPC1P7-201ENST00000413177 1513 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 SNORA63-201ENST00000363450 132 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 SNORA38.1-201ENST00000364172 131 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 SNORA62.1-201ENST00000364287 154 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.301-201ENST00000364990 103 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 RNU6-328P-201ENST00000390887 106 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 U3.42-201ENST00000408746 214 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 RNA5SP56-201ENST00000410277 118 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 RNU2-36P-201ENST00000410361 191 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC114491.1-201ENST00000416095 246 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 RPL36AP6-201ENST00000435770 321 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 RPL21P99-201ENST00000480369 423 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 RPL7P23-201ENST00000493874 747 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC023141.12-201ENST00000512399 199 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.665-201ENST00000516177 98 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 DEFB108D-201ENST00000527787 222 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC026464.5-201ENST00000562497 722 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC067852.4-201ENST00000590314 478 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC104237.2-201ENST00000612456 443 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 uc_338.11-201ENST00000619132 160 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AC011155.2-201ENST00000623202 216 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.2□□□□□ -1.9
LMO3Q8TAP4 AP001486.2-201ENST00000561652 5113 ntBASIC3.2□□□□□ -1.9
LMO3Q8TAP4 TAB3P1-202ENST00000452645 1634 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AC090229.1-201ENST00000590983 1609 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AC073343.1-201ENST00000328239 651 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.162-201ENST00000363683 102 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.167-201ENST00000363735 109 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RNU6-1029P-201ENST00000384109 107 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 MT-TC-201ENST00000387405 66 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RNU4-26P-201ENST00000410270 107 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RNU6-516P-201ENST00000411381 104 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 USP9YP20-201ENST00000419224 558 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AC018630.2-202ENST00000422992 927 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RPL35AP22-201ENST00000436855 335 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 SNRPGP5-201ENST00000456003 220 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 RPS29P15-201ENST00000458329 171 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 Y_RNA.632-201ENST00000459189 102 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AC096576.1-201ENST00000489014 359 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.19□□□□□ -1.9
LMO3Q8TAP4 FAM60DP-201ENST00000524174 632 ntBASIC3.19□□□□□ -1.9
LMO3Q8TAP4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms