Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC090615.1-201ENST00000577519 154 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 MIR3683-201ENST00000580847 82 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC069304.2-201ENST00000605154 435 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC022202.1-201ENST00000613515 211 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AP003400.5-201ENST00000624827 617 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.76□□□□□ -2.13
CCDC112Q8NEF3 AC107982.1-201ENST00000507171 1300 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 UBE2L2-201ENST00000254302 429 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 RNU6-28P-201ENST00000362378 107 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 RNU4-42P-201ENST00000364738 142 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 RNU2-33P-201ENST00000410344 192 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AL592045.1-201ENST00000429867 352 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AC026414.1-201ENST00000504046 698 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 U4atac.1-201ENST00000618345 95 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 MTND5P10-201ENST00000603719 1809 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 ZNF876P-202ENST00000398732 1485 ntBASIC1.75□□□□□ -2.13
CCDC112Q8NEF3 RNU6-343P-201ENST00000364709 104 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 Z98749.2-208ENST00000381646 500 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 MIR320A-201ENST00000385302 82 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AL079342.2-201ENST00000403367 482 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 MTCO1P3-201ENST00000429327 192 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 MTND2P20-201ENST00000440805 661 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 RPS27AP10-201ENST00000496103 208 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC114981.1-201ENST00000503897 678 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC008526.1-201ENST00000509149 338 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 CYB5AP5-201ENST00000549779 389 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC007151.1-201ENST00000572774 483 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC005034.5-201ENST00000604219 466 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AL445435.1-201ENST00000604232 665 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AC007490.1-201ENST00000624321 703 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 AL159972.1-201ENST00000625150 448 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 MIR4275-201ENST00000636486 87 ntBASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CCDC112Q8NEF3 Y_RNA.234-201ENST00000364409 97 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 RNU1-39P-201ENST00000383897 165 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 RNU6-14P-201ENST00000384630 106 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 RNU6-748P-201ENST00000384648 107 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 RNA5SP213-201ENST00000391031 106 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 SNORA67.5-201ENST00000391036 107 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 U6atac.2-201ENST00000408644 118 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 TPMTP2-201ENST00000414372 726 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 BTF3P8-201ENST00000414577 526 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 FO393415.2-201ENST00000480085 343 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AP004607.1-201ENST00000524456 203 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 GNAI2P1-201ENST00000541815 315 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 HIGD1AP17-201ENST00000554576 276 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AC012435.1-202ENST00000568772 240 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 MIR3126-201ENST00000577443 74 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AC024619.4-201ENST00000580924 316 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AP001004.1-201ENST00000582468 324 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AC243773.3-201ENST00000613270 256 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 AC008555.8-201ENST00000623602 2168 ntBASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CCDC112Q8NEF3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 MIR378A-201ENST00000362177 66 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AC068050.1-201ENST00000394891 380 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 AL627390.1-201ENST00000396055 340 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 HMGN2P39-201ENST00000398005 273 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 RNU2-42P-201ENST00000410697 113 ntBASIC1.72□□□□□ -2.13
CCDC112Q8NEF3 RNA5SP450-201ENST00000411206 102 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms