Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 AL162424.1-201ENST00000602325 221 ntBASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 AC015914.2-201ENST00000618167 288 ntBASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 MIR7641-1-201ENST00000627518 61 ntBASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 AC241585.2-209ENST00000638217 143 ntBASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.06□□□□□ -1.6
PHTF2Q8N3S3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AP001642.1-201ENST00000624727 2117 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RNU6-1020P-201ENST00000363684 107 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RNU1-32P-201ENST00000363937 159 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RNU6-187P-201ENST00000384139 106 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RNU6-514P-201ENST00000384208 107 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RNU6-102P-201ENST00000384485 104 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 Y_RNA.626-201ENST00000411288 95 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 EIF1P2-201ENST00000428233 350 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 COX6CP13-201ENST00000428703 226 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AC011742.1-201ENST00000431448 434 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RPS17P2-201ENST00000461663 408 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RPL30P1-201ENST00000488676 339 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 Y_RNA.679-201ENST00000516416 91 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 RNU6-255P-201ENST00000516957 105 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AC136601.2-201ENST00000604356 474 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 BRDTP1-201ENST00000605735 677 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 MIR378J-201ENST00000611988 109 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AC024581.2-201ENST00000619986 252 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 CR381572.2-201ENST00000624852 397 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 Z73965.1-201ENST00000623412 2297 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 AC118273.1-201ENST00000525324 3006 ntBASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.05□□□□□ -1.6
PHTF2Q8N3S3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 U3.15-201ENST00000365398 212 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 Y_RNA.504-201ENST00000384481 104 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 Y_RNA.569-201ENST00000384749 103 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RPS4XP3-201ENST00000398541 413 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RPS16P5-201ENST00000406501 404 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AC016397.1-201ENST00000412463 242 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AL390729.2-201ENST00000416137 156 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 COX6CP10-201ENST00000416832 224 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 MRPL42P6-201ENST00000486397 371 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RNU6-1114P-201ENST00000516022 107 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RNU6-1198P-201ENST00000516904 67 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AP001880.2-201ENST00000538233 448 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RN7SL690P-201ENST00000582087 240 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RN7SL435P-201ENST00000584418 282 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AL590392.1-201ENST00000604960 446 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AC072026.1-201ENST00000605023 201 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AL356157.2-201ENST00000605122 111 ntBASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
PHTF2Q8N3S3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 SNORA25.1-201ENST00000362326 128 ntBASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 Y_RNA.76-201ENST00000362931 109 ntBASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 RNU6-140P-201ENST00000384566 108 ntBASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 RNU1-139P-201ENST00000391307 165 ntBASIC5.03□□□□□ -1.6
PHTF2Q8N3S3 AL035079.1-201ENST00000405210 287 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms