Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC006504.3-201ENST00000586818 523 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 RBM11P1-201ENST00000604951 799 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC005000.2-201ENST00000605468 310 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AC002076.2-201ENST00000617362 122 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 AL356321.1-201ENST00000621360 228 ntBASIC3.06□□□□□ -1.92
BEST3Q8N1M1 FER-210ENST00000628534 558 ntTSL 5 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
BEST3Q8N1M1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.256-201ENST00000364594 104 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RPS4XP3-201ENST00000398541 413 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RNA5SP293-201ENST00000410527 113 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RNA5SP31-201ENST00000411144 127 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC126124.2-201ENST00000413542 321 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 OR6C66P-201ENST00000414917 930 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC245291.1-201ENST00000419501 328 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RPL7P46-201ENST00000425129 740 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RPL23AP69-201ENST00000431134 458 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RPS24P13-201ENST00000442520 397 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AP002884.2-201ENST00000471647 395 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC092989.1-201ENST00000481235 277 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RPS15AP34-201ENST00000487776 387 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC092436.1-201ENST00000506450 503 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC117522.3-201ENST00000507974 584 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 RNU6-914P-201ENST00000516749 109 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 MTND1P35-201ENST00000526739 508 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC015917.1-201ENST00000579654 510 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AL670379.4-201ENST00000605279 254 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC073657.2-201ENST00000605661 303 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 MIR6076-201ENST00000617521 113 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 YWHAEP7-203ENST00000622054 312 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 AC022336.2-201ENST00000568966 2538 ntBASIC3.05□□□□□ -1.92
BEST3Q8N1M1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
BEST3Q8N1M1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 MTND4P14-201ENST00000435799 1354 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNU6-552P-201ENST00000362869 119 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNA5SP374-201ENST00000362939 125 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.248-201ENST00000364501 109 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 MIR128-1-201ENST00000384921 82 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 MIR301A-201ENST00000385261 86 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 SNORA48.2-201ENST00000390926 124 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNU6-903P-201ENST00000391270 109 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNU6-908P-201ENST00000410160 94 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNU4-46P-201ENST00000410818 138 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNA5SP111-201ENST00000411386 101 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC007390.1-201ENST00000415722 356 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AL353678.1-201ENST00000422735 741 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 MTCYBP8-201ENST00000422855 651 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 GPM6BP2-201ENST00000432046 144 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AL591704.1-201ENST00000432574 275 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 GPM6BP1-201ENST00000446387 144 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AL590664.1-201ENST00000448065 339 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 HMGN1P18-201ENST00000457642 277 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RPL21P8-201ENST00000465083 535 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 TRBV1-201ENST00000476502 284 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AL135752.1-201ENST00000479477 471 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC109927.2-201ENST00000506416 303 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 RNU6-1178P-201ENST00000516674 107 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC107934.2-201ENST00000518653 310 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AP005435.4-201ENST00000529514 284 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.04□□□□□ -1.92
BEST3Q8N1M1 HMGB1P14-201ENST00000557424 591 ntBASIC3.04□□□□□ -1.92
BEST3Q8N1M1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms