Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU7-63P-201ENST00000459054 62 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 RN7SL863P-201ENST00000462370 296 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL049874.1-201ENST00000489560 388 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC105417.1-201ENST00000514691 285 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 SNORA64.4-201ENST00000516632 81 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 MIR2276-201ENST00000516886 89 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 OR5B19P-201ENST00000531766 928 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC007619.2-201ENST00000605743 379 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC008536.2-201ENST00000607284 349 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AC104458.1-201ENST00000608243 463 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 AL589994.2-201ENST00000621124 579 ntBASIC3.5□□□□□ -1.85
VPS52Q8N1B4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS52Q8N1B4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AL139276.1-201ENST00000311910 1001 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 RNA5SP383-201ENST00000362934 120 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 RNU6-179P-201ENST00000363350 107 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 RNU6-817P-201ENST00000391083 104 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AL354719.1-201ENST00000406535 843 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 RNA5SP293-201ENST00000410527 113 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 ELOCP14-201ENST00000428070 331 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 MTND1P2-201ENST00000430604 821 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AL139415.2-201ENST00000431968 163 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 ELOCP7-201ENST00000439968 331 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 RNU7-182P-201ENST00000459009 62 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 GMFBP1-201ENST00000467831 427 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 FAM92A1P2-202ENST00000504766 877 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 RNU6-1281P-201ENST00000516223 105 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 RNU6-711P-201ENST00000517255 106 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC055876.1-202ENST00000567053 138 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AL162413.1-201ENST00000603198 110 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 FER-210ENST00000628534 558 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC004972.1-201ENST00000623934 2209 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 AC006020.1-201ENST00000420179 1854 ntBASIC3.49□□□□□ -1.85
VPS52Q8N1B4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS52Q8N1B4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC103710.2-202ENST00000641454 2853 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 RNU6-534P-201ENST00000364877 106 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 Y_RNA.453-201ENST00000384223 109 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 RNU1-101P-201ENST00000391171 127 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL139397.2-201ENST00000404529 772 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL591034.1-201ENST00000407447 340 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 RNU6-387P-201ENST00000411331 105 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 Z85995.1-201ENST00000415547 335 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL356867.1-201ENST00000429623 299 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL353705.1-201ENST00000433468 480 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL596276.1-201ENST00000434465 418 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 BNIP3P2-201ENST00000441221 577 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 NEFMP1-201ENST00000443423 1006 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 CACYBPP2-201ENST00000453625 678 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC087588.1-201ENST00000462203 316 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 RPS29P25-201ENST00000481709 171 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC096576.1-201ENST00000489014 359 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC098591.2-201ENST00000510152 315 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC022080.3-201ENST00000544433 482 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AP005205.1-201ENST00000563503 508 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 MIR4298-201ENST00000584380 73 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC008752.3-201ENST00000588113 712 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 BNIP3P30-201ENST00000601184 574 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 DPPA3P3-201ENST00000603842 430 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC104763.2-201ENST00000604179 382 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AL157817.1-201ENST00000614264 790 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC025034.2-201ENST00000623264 286 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 AC018692.3-201ENST00000623929 123 ntBASIC3.48□□□□□ -1.85
VPS52Q8N1B4 CKAP2P1-201ENST00000555477 2049 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms