Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 SNRPEP9-201ENST00000436794 238 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 HMGB3P12-201ENST00000438745 556 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 ELOCP7-201ENST00000439968 331 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AL022238.1-201ENST00000442557 355 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 ST13P20-201ENST00000447996 1065 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 CECR9-201ENST00000453421 199 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC027673.1-201ENST00000456245 405 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 SNORD42A-201ENST00000459584 64 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 RAP1BP2-201ENST00000478270 544 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC137800.2-201ENST00000574375 120 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 MIR3682-201ENST00000581338 84 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 DUXAP4-201ENST00000603046 613 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 SEPT7P9-203ENST00000604116 343 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC004805.2-201ENST00000605382 482 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 RPL23AP88-201ENST00000605759 454 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC107294.1-201ENST00000609524 467 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL137003.2-201ENST00000606924 2538 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-188P-201ENST00000364207 107 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 RNU1-100P-201ENST00000365255 165 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 SNORD116-2-201ENST00000384274 95 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-297P-201ENST00000384636 107 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 SNORD116-6-201ENST00000384711 96 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-817P-201ENST00000391083 104 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC127391.1-201ENST00000411737 98 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 GPM6BP2-201ENST00000432046 144 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC104850.1-201ENST00000435940 476 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 MTND4P25-201ENST00000441039 533 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 GPM6BP1-201ENST00000446387 144 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 RNU7-23P-201ENST00000459465 62 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC117532.1-201ENST00000514638 323 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL356057.1-201ENST00000533798 831 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL391261.3-201ENST00000557194 520 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL358072.1-201ENST00000604156 575 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC104763.2-201ENST00000604179 382 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL136363.1-201ENST00000605349 337 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC004852.3-201ENST00000614131 326 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AL133173.2-201ENST00000614270 90 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 MIR6817-201ENST00000615588 66 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 PISRT1-201ENST00000626175 531 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 AC110994.2-201ENST00000635481 492 ntBASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
C9orf40Q8IXQ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-288P-201ENST00000363690 104 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNA5SP68-201ENST00000363885 119 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-884P-201ENST00000363889 107 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-960P-201ENST00000364056 120 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNY1P12-201ENST00000364251 105 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNA5SP139-201ENST00000364340 117 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 U3.12-201ENST00000364498 214 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 SNORA20.2-201ENST00000383922 131 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 SNORD21-201ENST00000383953 95 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 UBE2V1P2-201ENST00000397758 440 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RPS3AP36-201ENST00000398190 775 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-195P-201ENST00000411352 109 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 ISCA1P1-201ENST00000426679 387 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 CR769767.1-201ENST00000436337 346 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 GAPDHP17-201ENST00000449858 1001 ntBASIC2.36□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-953P-201ENST00000459154 107 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms