Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC009812.2-201ENST00000517657 457 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 OR5AL2P-201ENST00000532185 920 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 MIR2682-201ENST00000580305 110 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AC013412.1-201ENST00000610687 192 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AC012409.4-201ENST00000612923 249 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AC130324.3-201ENST00000614165 542 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AC099506.2-201ENST00000623074 221 ntBASIC3.48□□□□□ -1.85
HERC6Q8IVU3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HERC6Q8IVU3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC126124.2-201ENST00000413542 321 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 USP9YP6-201ENST00000413550 854 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 SDCBPP3-201ENST00000419629 891 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 RPL36AP53-201ENST00000432891 316 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 BX679664.1-201ENST00000434429 253 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 DNAJC19P4-201ENST00000440115 345 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 RPL23AP20-201ENST00000447965 421 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 CECR9-201ENST00000453421 199 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 SRRM1P2-201ENST00000464531 1192 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 MRPS17P3-201ENST00000465453 385 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 TRBV1-201ENST00000476502 284 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 RPS4XP22-201ENST00000480755 780 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC105417.1-201ENST00000514691 285 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC107934.2-201ENST00000518653 310 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AP000867.2-201ENST00000532468 320 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 MIR3162-201ENST00000581818 82 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC004805.2-201ENST00000605382 482 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC004852.3-201ENST00000614131 326 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AL161629.2-201ENST00000615347 275 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AC093648.1-201ENST00000623546 606 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 AL512643.1-201ENST00000635735 524 ntBASIC3.47□□□□□ -1.85
HERC6Q8IVU3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HERC6Q8IVU3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 SNORA62.1-201ENST00000364287 154 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 RNU6-61P-201ENST00000365528 109 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 RNU1-101P-201ENST00000391171 127 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 MTCO3P40-201ENST00000392516 676 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 MIR888-201ENST00000401186 77 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AL139397.2-201ENST00000404529 772 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 RNU2-9P-201ENST00000410194 145 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 RNA5SP111-201ENST00000411386 101 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AL591704.1-201ENST00000432574 275 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 OR2B8P-201ENST00000432841 938 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 FABP5P15-201ENST00000453566 214 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC027673.1-201ENST00000456245 405 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 snoU13.28-201ENST00000459235 104 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC006512.1-201ENST00000468816 291 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 ARL4AP2-201ENST00000507378 601 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 RNU6-506P-201ENST00000516553 94 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 RNA5SP503-201ENST00000517047 117 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 RNA5SP165-201ENST00000517142 115 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC093331.1-201ENST00000521474 169 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 OR5BN1P-201ENST00000532955 829 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC024619.4-201ENST00000580924 316 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 MIR3945-201ENST00000581853 98 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC025449.1-201ENST00000603896 529 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.46□□□□□ -1.86
HERC6Q8IVU3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
HERC6Q8IVU3 AC103710.2-202ENST00000641454 2853 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HERC6Q8IVU3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 RNU6-1215P-201ENST00000384441 102 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 Y_RNA.516-201ENST00000384541 124 ntBASIC3.45□□□□□ -1.86
HERC6Q8IVU3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms