Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL133383.2-201ENST00000622958 2336 ntBASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NPAS4Q8IUM7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 SPRR2C-201ENST00000290702 219 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 RNU5E-7P-201ENST00000365290 117 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 RNU1-115P-201ENST00000365329 160 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 MIR888-201ENST00000401186 77 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 SYF2P2-201ENST00000417620 583 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 AC007389.2-201ENST00000434630 306 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 HMGN2P16-201ENST00000456802 261 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 AC091153.1-201ENST00000466297 402 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 AC113155.1-201ENST00000511141 769 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 RNY3P15-201ENST00000516297 97 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 AC010186.2-204ENST00000537668 439 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 TRAV32-201ENST00000553993 340 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 AC015912.2-201ENST00000571053 181 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 RNF138P2-201ENST00000603490 592 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 AC016727.2-201ENST00000603988 621 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 AC004825.2-201ENST00000616634 455 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 MIR8059-201ENST00000620427 81 ntBASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NPAS4Q8IUM7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC083843.3-201ENST00000623679 2186 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC032011.1-201ENST00000611703 1549 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RN7SKP280-201ENST00000364196 304 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RNU6-596P-201ENST00000365395 98 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RNU6-658P-201ENST00000384606 106 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 SNORA41-201ENST00000384675 132 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 SNORA1.3-201ENST00000384676 136 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AL513475.1-201ENST00000406602 315 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RPL23AP52-201ENST00000439311 478 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RPL21P2-201ENST00000440049 481 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 DYNLT3P2-201ENST00000442517 295 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RPL23AP45-201ENST00000476406 468 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RPL21P129-201ENST00000491732 478 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC008958.1-201ENST00000511047 682 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 Y_RNA.680-201ENST00000516441 93 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 RNA5SP230-201ENST00000517039 122 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC233702.9-201ENST00000581528 203 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 MIR4273-201ENST00000582824 84 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC009314.1-201ENST00000603871 304 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 SNORD58B-201ENST00000607313 66 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 AC015914.2-201ENST00000618167 288 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 FP236240.3-201ENST00000623061 327 ntBASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NPAS4Q8IUM7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 SRP72P2-201ENST00000344851 1979 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 RNU6-874P-201ENST00000362390 105 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 Y_RNA.552-201ENST00000384665 112 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AL356968.1-201ENST00000416622 474 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AC243428.1-201ENST00000421099 264 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AL132765.1-201ENST00000434165 553 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AC133134.1-201ENST00000466800 359 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 RN7SL812P-201ENST00000493791 279 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AK3P2-201ENST00000507976 429 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 RNU6-408P-201ENST00000515910 100 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 RNU4-77P-201ENST00000516692 156 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AC131281.1-201ENST00000522984 164 ntBASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.77□□□□□ -1.65
NPAS4Q8IUM7 SNX18P1Y-201ENST00000616231 511 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 450.8 ms