Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RNA5SP447-201ENST00000363749 119 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RNF135Q8IUD6 RNU6-741P-201ENST00000383889 107 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF135Q8IUD6 TOMM22P1-201ENST00000418578 312 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 RPS6P12-201ENST00000432491 726 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.21□□□□□ -1.58
RNF135Q8IUD6 AL354714.3-201ENST00000447284 493 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 snoU13.4-201ENST00000458916 104 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 RPL21P104-201ENST00000464143 478 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF135Q8IUD6 ENPP7P9-201ENST00000514456 627 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 RNA5SP291-201ENST00000517222 105 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 AC090617.3-201ENST00000573670 475 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.21□□□□□ -1.58
RNF135Q8IUD6 AC072026.1-201ENST00000605023 201 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 AC240442.1-201ENST00000616055 283 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 MIR6853-201ENST00000619642 74 ntBASIC5.21□□□□□ -1.58
RNF135Q8IUD6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 SNORA70F-201ENST00000384142 135 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 RNU6-22P-201ENST00000384355 107 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 SNORD78.2-201ENST00000391076 69 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 Y_RNA.602-201ENST00000410535 92 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 BX323845.1-201ENST00000432417 179 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AURKAPS2-201ENST00000454983 333 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 KC877373.1-201ENST00000479066 408 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 RNU6-1012P-201ENST00000516606 109 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 RNA5SP230-201ENST00000517039 122 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AP005432.2-201ENST00000608162 586 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF135Q8IUD6 AC090740.1-201ENST00000623193 2262 ntBASIC5.2□□□□□ -1.58
RNF135Q8IUD6 HAUS6P2-201ENST00000433254 2404 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC025031.4-201ENST00000621248 3271 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC104623.2-202ENST00000623477 4002 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AL731532.2-201ENST00000623542 1953 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RNU6-78P-201ENST00000362897 107 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RNU6-1020P-201ENST00000363684 107 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RNU1-64P-201ENST00000365443 163 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AL359837.1-201ENST00000381357 287 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RNU6-47P-201ENST00000383866 107 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RNU6-804P-201ENST00000384286 107 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 MIR129-1-201ENST00000384972 72 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 BTF3L4P2-201ENST00000392798 346 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RN7SKP51-201ENST00000410781 304 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RNU2-68P-201ENST00000410878 191 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 Y_RNA.626-201ENST00000411288 95 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 COX5BP7-201ENST00000414780 274 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 snoU109.2-201ENST00000459316 135 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 TOMM22P6-201ENST00000465035 409 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 HMGB1P22-201ENST00000505315 124 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 SEPT14P8-201ENST00000508026 178 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC010265.1-201ENST00000513509 211 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 Y_RNA.662-201ENST00000516028 97 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 RNU6-479P-201ENST00000516348 105 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 SNORA31.18-201ENST00000517043 134 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC233702.9-201ENST00000581528 203 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 MIR4660-201ENST00000583549 74 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 VN1R85P-201ENST00000601587 426 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC027309.3-201ENST00000623419 351 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC011944.2-201ENST00000624440 683 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 AC092376.2-201ENST00000622621 4116 ntBASIC5.19□□□□□ -1.58
RNF135Q8IUD6 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RNF135Q8IUD6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms