Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.26□□□□□ -1.73
RNF111Q6ZNA4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF111Q6ZNA4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF111Q6ZNA4 ZNF299P-201ENST00000406845 1804 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 RNU6-384P-201ENST00000364900 104 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 RNU6-398P-201ENST00000384143 109 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 Y_RNA.471-201ENST00000384312 102 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 MIR514A1-201ENST00000385133 98 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AL096701.2-201ENST00000416920 238 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AC007098.1-201ENST00000420122 367 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AL158156.1-201ENST00000422509 473 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AC091390.3-201ENST00000426478 338 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AL159987.2-201ENST00000432754 307 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 FCF1P4-201ENST00000448326 183 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AC087190.4-201ENST00000574616 8334 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AC006065.5-201ENST00000623427 349 ntBASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF111Q6ZNA4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AC007685.1-201ENST00000329806 452 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 RNA5SP307-201ENST00000362863 116 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 RNU6-827P-201ENST00000365553 106 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 RNU6-708P-201ENST00000384217 107 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 Y_RNA.562-201ENST00000384695 113 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 SNORA69.1-201ENST00000390904 137 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 RNU6-700P-201ENST00000391043 107 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 RNU6-1093P-201ENST00000391194 107 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AL592148.1-201ENST00000413568 445 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 MTCO3P19-201ENST00000415864 321 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 RPL23AP93-201ENST00000440847 484 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 LINC01399-202ENST00000458450 244 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AP003733.2-201ENST00000529409 171 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 MIR5701-3-201ENST00000578890 82 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 MIR4330-201ENST00000579077 105 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 MIR5701-1-201ENST00000585138 82 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 AC234771.5-201ENST00000600161 514 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 MIR5701-2-201ENST00000615634 82 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 SDR42E1P4-201ENST00000620894 481 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 ASNSP1-201ENST00000518311 1939 ntBASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF111Q6ZNA4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 Y_RNA.105-201ENST00000363182 111 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 RNU6-595P-201ENST00000363944 107 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 RNU6-173P-201ENST00000364215 104 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AC245028.1-201ENST00000423259 256 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AC087650.1-201ENST00000431445 468 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AL132765.1-201ENST00000434165 553 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 ABCF2P2-201ENST00000450549 296 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 RN7SL738P-201ENST00000470264 297 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 TRBVB-201ENST00000477100 408 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 MLLT10P2-201ENST00000506434 249 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 RN7SKP92-201ENST00000517266 244 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AC109329.1-201ENST00000518744 317 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AC084851.1-201ENST00000529105 249 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AL360157.1-201ENST00000565962 87 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AL731566.2-201ENST00000618971 317 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AP005019.3-201ENST00000620418 560 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 MIR7703-201ENST00000620784 77 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 AL360181.4-201ENST00000621752 134 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 MIR6715B-201ENST00000637172 77 ntBASIC4.23□□□□□ -1.73
RNF111Q6ZNA4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms