Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 MIR422A-201ENST00000362286 90 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-1085P-201ENST00000363576 107 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RPL5P18-201ENST00000406671 891 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 MIR548F1-201ENST00000408667 84 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AC022018.1-201ENST00000430685 241 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 BNIP3P2-201ENST00000441221 577 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RPS24P13-201ENST00000442520 397 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RPL27AP5-201ENST00000469428 449 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RN7SL633P-201ENST00000488974 297 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RNA5SP385-201ENST00000515947 110 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-314P-201ENST00000516574 104 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 SNORD59.2-201ENST00000516873 68 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RNU6-685P-201ENST00000517088 95 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 RN7SKP57-201ENST00000517248 293 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AC009812.2-201ENST00000517657 457 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 OR5AQ1P-201ENST00000527596 927 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 TRAV28-201ENST00000557548 323 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AC007621.1-201ENST00000604544 437 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 U6atac.1-201ENST00000616025 117 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 AL589994.2-201ENST00000621124 579 ntBASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SYNE3Q6ZMZ3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
SYNE3Q6ZMZ3 AC093831.2-201ENST00000624393 3427 ntBASIC3.53□□□□□ -1.85
SYNE3Q6ZMZ3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC007785.2-201ENST00000598627 1916 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-179P-201ENST00000363350 107 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-780P-201ENST00000391030 104 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC068050.1-201ENST00000394891 380 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC114491.1-201ENST00000416095 246 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 MTCYBP5-201ENST00000423752 1135 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC009969.1-201ENST00000438726 172 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 Z82210.1-201ENST00000440037 231 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC027673.1-201ENST00000456245 405 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 RNU7-182P-201ENST00000459009 62 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 RPL36AP51-201ENST00000487216 318 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC105417.1-201ENST00000514691 285 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 MTND4LP26-201ENST00000518144 282 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 H3F3AP1-201ENST00000559984 334 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC002545.1-201ENST00000592511 181 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 Z84480.1-201ENST00000605131 311 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 AC009570.1-201ENST00000609599 745 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 uc_338.11-201ENST00000619132 160 ntBASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SYNE3Q6ZMZ3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 RNY4P14-201ENST00000363656 96 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.450-201ENST00000384198 113 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AL138885.1-201ENST00000405921 675 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AL591034.1-201ENST00000407447 340 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC092047.1-201ENST00000424997 240 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC000111.3-201ENST00000433478 193 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC016691.1-201ENST00000441321 413 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-420P-201ENST00000458780 107 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-261P-201ENST00000459506 102 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 GMFBP1-201ENST00000467831 427 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 RPS26P21-201ENST00000475397 348 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AL135752.1-201ENST00000479477 471 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 RN7SL283P-201ENST00000489055 303 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 AC108078.2-201ENST00000510750 236 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-677P-201ENST00000516914 101 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 RNU6-835P-201ENST00000516974 104 ntBASIC3.51□□□□□ -1.85
SYNE3Q6ZMZ3 SNORA70.24-201ENST00000517233 118 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms