Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AP001960.1-201ENST00000506494 658 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 AC098591.2-201ENST00000510152 315 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 AGGF1P5-201ENST00000567900 919 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 AC025165.5-201ENST00000602802 578 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 DUXAP10-204ENST00000612052 616 ntBASIC0.59□□□□□ -2.32
CSPG4Q6UVK1 AC007785.2-201ENST00000598627 1916 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 KLF3P2-201ENST00000465138 268 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC008676.3-201ENST00000521237 435 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 BNIP3P26-201ENST00000600827 554 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC010620.1-201ENST00000601088 1102 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC092474.3-201ENST00000603022 568 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 SNORD14A-201ENST00000606526 91 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 MIR7515-201ENST00000637837 67 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 OR5H6-203ENST00000642105 978 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AP000776.1-201ENST00000530032 1663 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 SNORD65-201ENST00000391079 73 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AL513475.1-201ENST00000406602 315 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 MIR1250-201ENST00000408098 113 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 TOMM22P2-201ENST00000430735 237 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC073614.1-201ENST00000438690 650 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AL034418.1-201ENST00000448675 860 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 MTATP6P7-201ENST00000453315 681 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 snoU13.28-201ENST00000459235 104 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 HMGN1P10-201ENST00000474557 553 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC115085.1-201ENST00000588924 229 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC003001.2-201ENST00000616294 831 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 AC027309.3-201ENST00000623419 351 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 OR4G3P-201ENST00000633500 913 ntBASIC0.58□□□□□ -2.32
CSPG4Q6UVK1 MIR676-201ENST00000390702 67 ntBASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 MIR934-201ENST00000401241 83 ntBASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 EDDM3CP-201ENST00000415977 425 ntBASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 FAM206BP-201ENST00000510179 541 ntBASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 AL391261.3-201ENST00000557194 520 ntBASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 AC022387.2-201ENST00000604050 448 ntBASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 LINC02211-204ENST00000642024 1070 ntBASIC0.57□□□□□ -2.32
CSPG4Q6UVK1 SNORA63.3-201ENST00000362682 132 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 RNA5SP450-201ENST00000411206 102 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 SEPT2P1-201ENST00000419651 180 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC079448.1-201ENST00000449377 373 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC118273.2-201ENST00000532092 465 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC073111.2-201ENST00000605657 1075 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AL356776.1-201ENST00000406574 447 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 RPS3AP24-201ENST00000407896 734 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 MTCYBP34-201ENST00000439552 670 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC087884.1-201ENST00000469738 328 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC018437.1-201ENST00000492214 406 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 HSPE1P7-201ENST00000604681 321 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AC013244.3-201ENST00000605614 388 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 U6.48-201ENST00000618523 106 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 uc_338.22-201ENST00000622722 187 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 ELL2P3-201ENST00000457883 1602 ntBASIC0.56□□□□□ -2.32
CSPG4Q6UVK1 AL356473.1-201ENST00000406203 1408 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 RPS15AP27-201ENST00000449183 343 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC091965.2-201ENST00000512324 613 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC016065.2-201ENST00000514530 444 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 SNORA48.10-201ENST00000516965 160 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC090666.1-201ENST00000578241 445 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AL355812.1-201ENST00000603215 216 ntBASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.55□□□□□ -2.32
CSPG4Q6UVK1 AC021646.1-201ENST00000605469 484 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms