Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.99□□□□□ -1.93
CTR9Q6PD62 U4.3-201ENST00000621047 82 ntBASIC2.99□□□□□ -1.93
CTR9Q6PD62 AL390237.1-201ENST00000404226 1415 ntBASIC2.99□□□□□ -1.93
CTR9Q6PD62 AC093536.2-201ENST00000565257 1406 ntBASIC2.99□□□□□ -1.93
CTR9Q6PD62 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CTR9Q6PD62 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTR9Q6PD62 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CTR9Q6PD62 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC135776.4-201ENST00000624300 1904 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 U8.3-201ENST00000363321 132 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 RNU6-511P-201ENST00000363496 107 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 MIR144-201ENST00000384886 86 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 SNORA40.3-201ENST00000390964 122 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 RPS4XP3-201ENST00000398541 413 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 RNU6-248P-201ENST00000410720 107 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 ELOCP17-201ENST00000414751 326 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC080125.1-201ENST00000414888 684 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 SPA17P1-201ENST00000416656 452 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 RPL7L1P10-201ENST00000427790 463 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 USP12PX-201ENST00000432383 1057 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 SSXP1-201ENST00000453640 473 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 MTND1P12-201ENST00000455231 147 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC124947.2-202ENST00000552735 133 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 RSL24D1P11-201ENST00000591045 491 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC087752.4-201ENST00000605911 462 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC103710.1-201ENST00000610003 901 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 AC108479.2-201ENST00000617314 601 ntBASIC2.98□□□□□ -1.93
CTR9Q6PD62 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.98□□□□□ -1.93
CTR9Q6PD62 TEX21P-201ENST00000447107 1476 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTR9Q6PD62 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTR9Q6PD62 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 RNU5E-1-201ENST00000362477 120 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 RNU6-1284P-201ENST00000363701 100 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 RNA5SP126-201ENST00000365092 109 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 Y_RNA.553-201ENST00000384670 102 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CTR9Q6PD62 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 Z85995.1-201ENST00000415547 335 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AL356867.1-201ENST00000429623 299 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC092573.2-201ENST00000434546 243 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 MTCO1P19-201ENST00000443487 500 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CTR9Q6PD62 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 MTND2P24-201ENST00000453434 806 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AL033528.1-201ENST00000453780 140 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 LARP1BP2-201ENST00000486594 519 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC010587.1-201ENST00000505809 469 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC010424.1-201ENST00000506336 297 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC105313.1-201ENST00000509121 353 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC022447.1-201ENST00000515358 464 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 RNU6-390P-201ENST00000516259 103 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 Y_RNA.672-201ENST00000516289 104 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 RNA5SP337-201ENST00000517007 109 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 ARL2BPP2-201ENST00000550907 489 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 MYL12BP1-201ENST00000569826 507 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC008739.2-201ENST00000597006 317 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC007621.1-201ENST00000604544 437 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC009090.3-201ENST00000616553 565 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 AC006338.1-201ENST00000618453 749 ntBASIC2.97□□□□□ -1.93
CTR9Q6PD62 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CTR9Q6PD62 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CTR9Q6PD62 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CTR9Q6PD62 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CTR9Q6PD62 Y_RNA.51-201ENST00000362725 102 ntBASIC2.96□□□□□ -1.94
CTR9Q6PD62 SNORA75-201ENST00000384158 137 ntBASIC2.96□□□□□ -1.94
CTR9Q6PD62 SNORA80E-201ENST00000384744 137 ntBASIC2.96□□□□□ -1.94
CTR9Q6PD62 RNU2-62P-201ENST00000410868 191 ntBASIC2.96□□□□□ -1.94
CTR9Q6PD62 RPS15AP12-201ENST00000419498 388 ntBASIC2.96□□□□□ -1.94
CTR9Q6PD62 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.96□□□□□ -1.94
CTR9Q6PD62 AC092427.1-202ENST00000430569 476 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms