Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.471-201ENST00000384312 102 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR10A-201ENST00000385043 110 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR3065-201ENST00000390137 79 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNU6-700P-201ENST00000391043 107 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL022722.2-201ENST00000402519 180 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNA5SP494-201ENST00000410653 129 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 MTND3P9-201ENST00000429526 346 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 HIGD1AP2-201ENST00000446367 280 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RN7SL481P-201ENST00000477764 299 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL160314.1-201ENST00000490836 438 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RN7SL810P-201ENST00000493031 276 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 HMGB1P22-201ENST00000505315 124 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNA5SP290-201ENST00000517133 127 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC109329.1-201ENST00000518744 317 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC004024.1-201ENST00000549244 247 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RPL21P7-201ENST00000557463 483 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 SNRPGP15-201ENST00000600149 222 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RPL7P50-201ENST00000600588 727 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL390123.1-201ENST00000603216 237 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AP000787.2-201ENST00000604432 568 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR8076-201ENST00000611401 83 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC131238.1-201ENST00000617135 328 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL731566.2-201ENST00000618971 317 ntBASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DQA1Q5Y7H0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 RNA5SP307-201ENST00000362863 116 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.105-201ENST00000363182 111 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 SNORA20.1-201ENST00000364790 130 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR195-201ENST00000385194 87 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR628-201ENST00000385229 95 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 MTCO3P19-201ENST00000415864 321 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL117339.3-201ENST00000418733 162 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 EIF4EP2-201ENST00000422816 654 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 NDUFB1P2-201ENST00000449477 176 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 CEACAMP4-201ENST00000457676 421 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 RPL23AP24-201ENST00000458203 385 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC01399-202ENST00000458450 244 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 U8.21-201ENST00000459536 136 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 RPS20P22-201ENST00000473700 357 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 NIP7P2-201ENST00000485801 544 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AK3P2-201ENST00000507976 429 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 Y_RNA.673-201ENST00000516306 88 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC007375.1-201ENST00000554513 578 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR4284-201ENST00000578924 81 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL356218.2-201ENST00000605264 187 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AL161629.2-201ENST00000615347 275 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 uc_338.13-201ENST00000618243 179 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC141273.2-201ENST00000618989 130 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC130454.1-201ENST00000622948 401 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 AC005086.4-201ENST00000623065 213 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 MIR7641-1-201ENST00000627518 61 ntBASIC4.09□□□□□ -1.75
HLA-DQA1Q5Y7H0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 MTND5P6-201ENST00000422338 1798 ntBASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 AC139713.2-214ENST00000642059 1811 ntBASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
HLA-DQA1Q5Y7H0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 SNORD50.1-201ENST00000362987 71 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 U3.6-201ENST00000363622 211 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNA5SP175-201ENST00000364275 119 ntBASIC4.08□□□□□ -1.76
HLA-DQA1Q5Y7H0 RNU6-335P-201ENST00000364563 113 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms