Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 RNA5SP165-201ENST00000517142 115 ntBASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 AC022634.1-201ENST00000520765 532 ntBASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 RPL23AP78-201ENST00000599928 470 ntBASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 AC008498.1-201ENST00000613012 531 ntBASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 CR848007.1-201ENST00000442354 1699 ntBASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC30Q5VVM6 RNY1P12-201ENST00000364251 105 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RNA5SP354-201ENST00000391247 136 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 SNORD88.1-201ENST00000408684 91 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RPS12P24-201ENST00000412619 387 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RPL26P27-201ENST00000414397 437 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 ATG3P1-201ENST00000419507 911 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 AC009961.2-201ENST00000435771 251 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RPS24P1-201ENST00000438550 371 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 AC011816.1-201ENST00000441346 546 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RPL39P40-201ENST00000445481 146 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 ST13P20-201ENST00000447996 1065 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RPS3P1-201ENST00000456781 192 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RAP1BP2-201ENST00000478270 544 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RPL36AP51-201ENST00000487216 318 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 MTCO3P13-201ENST00000577757 781 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 AL355598.1-201ENST00000604169 202 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 AC107871.2-201ENST00000612894 502 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 AL158063.1-201ENST00000615349 536 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 MIR6733-201ENST00000635723 61 ntBASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC30Q5VVM6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.34□□□□□ -1.88
CCDC30Q5VVM6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.88
CCDC30Q5VVM6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CCDC30Q5VVM6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 SNORD62.1-201ENST00000362541 86 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 RNA5SP68-201ENST00000363885 119 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 RNU6-946P-201ENST00000383878 107 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 MTND4P25-201ENST00000441039 533 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 MTND2P4-201ENST00000445034 1004 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 RPL23AP11-201ENST00000475260 469 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AC126389.1-201ENST00000477436 290 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AC007182.2-201ENST00000489251 402 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 RPS27P26-201ENST00000494583 239 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 Vault.3-201ENST00000516676 95 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 RNU6-143P-201ENST00000516942 93 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AC243972.3-201ENST00000539655 198 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 NACAP3-201ENST00000552100 481 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 HMGN2P15-201ENST00000585707 270 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AC110760.3-201ENST00000598794 467 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 BNIP3P9-201ENST00000603714 553 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 ELL2P3-201ENST00000457883 1602 ntBASIC3.33□□□□□ -1.88
CCDC30Q5VVM6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 RNU6-778P-201ENST00000363269 103 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 RNU1-73P-201ENST00000383971 164 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 MIR558-201ENST00000384920 94 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 MIR767-201ENST00000390228 109 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 USP9YP20-201ENST00000419224 558 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 MED13P1-201ENST00000428342 171 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 RPL36AP53-201ENST00000432891 316 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 HMGB1P41-201ENST00000520234 440 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AC022616.3-201ENST00000523940 148 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 MIR6817-201ENST00000615588 66 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 Z69908.1-201ENST00000622603 247 ntBASIC3.32□□□□□ -1.88
CCDC30Q5VVM6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC30Q5VVM6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC30Q5VVM6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC30Q5VVM6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC30Q5VVM6 Y_RNA.77-201ENST00000362962 107 ntBASIC3.31□□□□□ -1.88
CCDC30Q5VVM6 RNU1-100P-201ENST00000365255 165 ntBASIC3.31□□□□□ -1.88
CCDC30Q5VVM6 SNORA20.2-201ENST00000383922 131 ntBASIC3.31□□□□□ -1.88
CCDC30Q5VVM6 RNU6-297P-201ENST00000384636 107 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms