Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL13A1Q5TAT6 SDAD1P2-201ENST00000441308 2028 ntBASIC4.94□□□□□ -1.62
COL13A1Q5TAT6 AL049555.1-201ENST00000562834 1933 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AC073136.1-201ENST00000449426 2884 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 RPL9P7-201ENST00000330965 580 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 Y_RNA.592-201ENST00000410274 109 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AL513331.1-201ENST00000411908 397 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AL513043.1-201ENST00000439124 535 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 RANP8-201ENST00000444720 713 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 PRELID3BP1-201ENST00000457142 540 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 RPL9P9-202ENST00000466501 579 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AC012158.1-204ENST00000483430 465 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AC110792.1-201ENST00000491826 472 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AC008489.1-201ENST00000524271 483 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AC068446.3-201ENST00000555285 382 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 RN7SL290P-201ENST00000578661 300 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 AC100778.3-201ENST00000580060 1750 ntBASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL13A1Q5TAT6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 RNU1-14P-201ENST00000362759 152 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 RNY1-201ENST00000364228 113 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 SNORA36C-201ENST00000384289 132 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 MIR3065-201ENST00000390137 79 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 SNORD58.1-201ENST00000391313 66 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 UBA52P6-201ENST00000399822 382 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 MIR1261-201ENST00000408659 82 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 U3.42-201ENST00000408746 214 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 RNU6-1203P-201ENST00000410703 110 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 AC092573.2-201ENST00000434546 243 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 RPS20P1-201ENST00000434853 354 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 RPL30P10-201ENST00000488148 337 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 AC026784.1-201ENST00000507986 352 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 LARP7P3-201ENST00000579888 337 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 MIR4660-201ENST00000583549 74 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 AC004852.3-201ENST00000614131 326 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 MIR8057-201ENST00000620957 69 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 Z99571.1-201ENST00000636677 394 ntBASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
COL13A1Q5TAT6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 MTND5P9-201ENST00000503854 1755 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 UBE2L2-201ENST00000254302 429 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 Y_RNA.27-201ENST00000362540 103 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 SNORD27-201ENST00000363981 72 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 Y_RNA.352-201ENST00000365439 102 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 MTCYBP2-201ENST00000407745 171 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 MTATP6P4-201ENST00000427725 675 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC104332.1-201ENST00000440471 797 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 RN7SL601P-201ENST00000471221 293 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 SUMO2P6-201ENST00000505273 288 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC104619.4-201ENST00000510773 249 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 TRAV37-201ENST00000553906 342 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AL157871.3-201ENST00000557231 293 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 AC005951.2-201ENST00000576282 495 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 SNORD84-203ENST00000584275 78 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 MIR8076-201ENST00000611401 83 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 Z75746.1-201ENST00000440243 2080 ntBASIC4.91□□□□□ -1.62
COL13A1Q5TAT6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms