Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL591416.1-201ENST00000404015 867 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 NDUFS5P1-201ENST00000405668 289 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.15□□□□□ -2.07
RFX4Q33E94 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.15□□□□□ -2.07
RFX4Q33E94 ELOCP14-201ENST00000428070 331 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 WARS2P1-201ENST00000429678 537 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 ELOCP7-201ENST00000439968 331 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX4Q33E94 AC013267.1-201ENST00000458227 267 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 MRPS17P3-201ENST00000465453 385 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 RPS3AP22-201ENST00000488297 769 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX4Q33E94 AF131216.2-201ENST00000512316 564 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.15□□□□□ -2.07
RFX4Q33E94 SNORA31.18-201ENST00000517043 134 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC109329.2-201ENST00000519658 482 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX4Q33E94 AP006587.4-201ENST00000526053 529 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 MTND4LP18-201ENST00000526864 291 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX4Q33E94 AL359212.1-201ENST00000556608 614 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 MIR3118-1-201ENST00000581787 76 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 MIR3616-201ENST00000584070 92 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX4Q33E94 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.15□□□□□ -2.07
RFX4Q33E94 KC877982.1-201ENST00000602313 470 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC004805.2-201ENST00000605382 482 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC239868.4-201ENST00000608318 671 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC103710.2-201ENST00000609912 942 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC103710.1-201ENST00000610003 901 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC013562.2-201ENST00000611632 603 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 uc_338.12-201ENST00000616344 181 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 AC079248.2-201ENST00000623779 326 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 MIR203B-201ENST00000636080 86 ntBASIC2.15□□□□□ -2.07
RFX4Q33E94 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
RFX4Q33E94 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RFX4Q33E94 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
RFX4Q33E94 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
RFX4Q33E94 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFX4Q33E94 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.14□□□□□ -2.07
RFX4Q33E94 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX4Q33E94 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RFX4Q33E94 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RFX4Q33E94 RNU6-511P-201ENST00000363496 107 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 RNU6-553P-201ENST00000364047 96 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 Y_RNA.245-201ENST00000364493 95 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 RNU6-701P-201ENST00000384059 107 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX4Q33E94 RNU2-36P-201ENST00000410361 191 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 ZNF90P2-204ENST00000419323 1075 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 NUP35P1-201ENST00000422734 947 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 SKA2P1-201ENST00000425592 390 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.14□□□□□ -2.07
RFX4Q33E94 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.14□□□□□ -2.07
RFX4Q33E94 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX4Q33E94 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX4Q33E94 GZMAP1-201ENST00000503054 631 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX4Q33E94 AC026436.1-201ENST00000510537 270 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 RNU6-232P-201ENST00000517144 64 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFX4Q33E94 AC023824.2-201ENST00000566185 400 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.14□□□□□ -2.07
RFX4Q33E94 AC135628.1-201ENST00000568867 534 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.14□□□□□ -2.07
RFX4Q33E94 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.14□□□□□ -2.07
RFX4Q33E94 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.14□□□□□ -2.07
RFX4Q33E94 AP001981.2-201ENST00000603241 418 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 AL022161.1-201ENST00000604390 213 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 AC063944.3-201ENST00000609969 533 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFX4Q33E94 AC090970.3-201ENST00000612566 866 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.14□□□□□ -2.07
RFX4Q33E94 U2.21-201ENST00000637295 81 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.14□□□□□ -2.07
RFX4Q33E94 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RFX4Q33E94 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
RFX4Q33E94 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RFX4Q33E94 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
RFX4Q33E94 SNORA5B-201ENST00000363786 132 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 RNU6-512P-201ENST00000364438 103 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 RN7SKP226-201ENST00000364912 300 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RFX4Q33E94 RNU6-278P-201ENST00000390945 109 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 SNORD115.1-201ENST00000391109 76 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 MIR888-201ENST00000401186 77 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 RNU6-920P-201ENST00000410926 92 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RFX4Q33E94 AC093106.2-201ENST00000428212 385 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 SNRPEP9-201ENST00000436794 238 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.13□□□□□ -2.07
RFX4Q33E94 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.13□□□□□ -2.07
RFX4Q33E94 AL590365.1-201ENST00000450788 243 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AL133217.1-201ENST00000450980 425 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AL109933.2-201ENST00000452651 260 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 ART2BP-201ENST00000453501 499 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 FABP5P15-201ENST00000453566 214 ntBASIC2.13□□□□□ -2.07
RFX4Q33E94 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms