Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.73□□□□□ -2.13
USF2Q15853 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.73□□□□□ -2.13
USF2Q15853 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.73□□□□□ -2.13
USF2Q15853 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.73□□□□□ -2.13
USF2Q15853 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.73□□□□□ -2.13
USF2Q15853 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.73□□□□□ -2.13
USF2Q15853 AC026271.5-201ENST00000577873 130 ntBASIC1.73□□□□□ -2.13
USF2Q15853 AC060771.1-201ENST00000582031 164 ntBASIC1.73□□□□□ -2.13
USF2Q15853 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.73□□□□□ -2.13
USF2Q15853 MIR4298-201ENST00000584380 73 ntBASIC1.73□□□□□ -2.13
USF2Q15853 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.73□□□□□ -2.13
USF2Q15853 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.73□□□□□ -2.13
USF2Q15853 AL078605.1-201ENST00000603529 500 ntBASIC1.73□□□□□ -2.13
USF2Q15853 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.73□□□□□ -2.13
USF2Q15853 AC017037.3-201ENST00000625016 472 ntBASIC1.73□□□□□ -2.13
USF2Q15853 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
USF2Q15853 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.72□□□□□ -2.13
USF2Q15853 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USF2Q15853 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USF2Q15853 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
USF2Q15853 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USF2Q15853 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USF2Q15853 SNORD115-3-201ENST00000363100 82 ntBASIC1.72□□□□□ -2.13
USF2Q15853 snoZ40.1-201ENST00000364540 72 ntBASIC1.72□□□□□ -2.13
USF2Q15853 RNU6-1280P-201ENST00000365211 107 ntBASIC1.72□□□□□ -2.13
USF2Q15853 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
USF2Q15853 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USF2Q15853 RSL24D1P4-201ENST00000400938 484 ntBASIC1.72□□□□□ -2.13
USF2Q15853 OR9R1P-201ENST00000412200 877 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.72□□□□□ -2.13
USF2Q15853 AC107081.1-201ENST00000414975 361 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AL353621.1-201ENST00000418219 243 ntBASIC1.72□□□□□ -2.13
USF2Q15853 ISCA1P1-201ENST00000426679 387 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AC104651.1-201ENST00000427559 735 ntBASIC1.72□□□□□ -2.13
USF2Q15853 RPL7P34-201ENST00000433316 712 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.72□□□□□ -2.13
USF2Q15853 RPL23AP7-203ENST00000449021 469 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AC025033.1-201ENST00000463883 194 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AC018868.1-201ENST00000491307 315 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.72□□□□□ -2.13
USF2Q15853 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.72□□□□□ -2.13
USF2Q15853 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.72□□□□□ -2.13
USF2Q15853 SNORA48.11-201ENST00000517015 89 ntBASIC1.72□□□□□ -2.13
USF2Q15853 ACA59.2-201ENST00000517061 156 ntBASIC1.72□□□□□ -2.13
USF2Q15853 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.72□□□□□ -2.13
USF2Q15853 AC079598.5-201ENST00000547460 117 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AL512347.1-201ENST00000566420 503 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.72□□□□□ -2.13
USF2Q15853 AL713866.2-201ENST00000603579 219 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AC034229.4-201ENST00000607861 441 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AC092953.2-201ENST00000608000 699 ntBASIC1.72□□□□□ -2.13
USF2Q15853 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.72□□□□□ -2.13
USF2Q15853 AC243829.7-201ENST00000633081 225 ntBASIC1.72□□□□□ -2.13
USF2Q15853 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.72□□□□□ -2.13
USF2Q15853 RNU1-23P-201ENST00000363361 144 ntBASIC1.71□□□□□ -2.14
USF2Q15853 RNA5SP126-201ENST00000365092 109 ntBASIC1.71□□□□□ -2.14
USF2Q15853 SNORA8-201ENST00000384574 139 ntBASIC1.71□□□□□ -2.14
USF2Q15853 MIR95-201ENST00000385072 81 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.71□□□□□ -2.14
USF2Q15853 TIMM9P2-201ENST00000419324 266 ntBASIC1.71□□□□□ -2.14
USF2Q15853 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.71□□□□□ -2.14
USF2Q15853 BTBD7P2-201ENST00000441962 620 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.71□□□□□ -2.14
USF2Q15853 AL021397.1-201ENST00000451806 248 ntBASIC1.71□□□□□ -2.14
USF2Q15853 RPL23AP41-201ENST00000484754 458 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.71□□□□□ -2.14
USF2Q15853 AC096571.1-202ENST00000506634 735 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AC116655.1-201ENST00000508324 901 ntBASIC1.71□□□□□ -2.14
USF2Q15853 RNA5SP281-201ENST00000516504 135 ntBASIC1.71□□□□□ -2.14
USF2Q15853 RN7SKP258-201ENST00000517151 304 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AC021451.1-201ENST00000523498 1129 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.71□□□□□ -2.14
USF2Q15853 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.71□□□□□ -2.14
USF2Q15853 AC023825.1-201ENST00000566704 1030 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AC126365.2-201ENST00000580630 379 ntBASIC1.71□□□□□ -2.14
USF2Q15853 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.71□□□□□ -2.14
USF2Q15853 SEPT7P9-203ENST00000604116 343 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AC013412.1-201ENST00000610687 192 ntBASIC1.71□□□□□ -2.14
USF2Q15853 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.71□□□□□ -2.14
USF2Q15853 AC009831.4-201ENST00000620744 325 ntBASIC1.71□□□□□ -2.14
USF2Q15853 RNU6-1032P-201ENST00000384100 107 ntBASIC1.7□□□□□ -2.14
USF2Q15853 SNORA67.4-201ENST00000384688 142 ntBASIC1.7□□□□□ -2.14
USF2Q15853 MIR221-201ENST00000385135 110 ntBASIC1.7□□□□□ -2.14
USF2Q15853 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
USF2Q15853 HMGB1P11-201ENST00000413899 637 ntBASIC1.7□□□□□ -2.14
USF2Q15853 VN1R36P-201ENST00000414936 291 ntBASIC1.7□□□□□ -2.14
USF2Q15853 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.7□□□□□ -2.14
USF2Q15853 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.7□□□□□ -2.14
USF2Q15853 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.7□□□□□ -2.14
USF2Q15853 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.7□□□□□ -2.14
USF2Q15853 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.7□□□□□ -2.14
USF2Q15853 ELOCP30-201ENST00000447108 299 ntBASIC1.7□□□□□ -2.14
USF2Q15853 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.7□□□□□ -2.14
USF2Q15853 AC117503.1-201ENST00000472241 394 ntBASIC1.7□□□□□ -2.14
USF2Q15853 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.7□□□□□ -2.14
USF2Q15853 RN7SL429P-201ENST00000479090 223 ntBASIC1.7□□□□□ -2.14
USF2Q15853 RN7SL489P-201ENST00000486185 223 ntBASIC1.7□□□□□ -2.14
USF2Q15853 RN7SL327P-201ENST00000488659 223 ntBASIC1.7□□□□□ -2.14
USF2Q15853 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
USF2Q15853 AC024589.1-201ENST00000512207 263 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms