Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
SF3A2Q15428 MIR4658-201ENST00000584344 65 ntBASIC2.23□□□□□ -2.05
SF3A2Q15428 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.23□□□□□ -2.05
SF3A2Q15428 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.23□□□□□ -2.05
SF3A2Q15428 MIR219B-201ENST00000637023 88 ntBASIC2.23□□□□□ -2.05
SF3A2Q15428 AC007336.1-201ENST00000576365 3828 ntBASIC2.23□□□□□ -2.05
SF3A2Q15428 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.23□□□□□ -2.05
SF3A2Q15428 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SF3A2Q15428 AC009902.3-201ENST00000606235 2172 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 ZNF876P-202ENST00000398732 1485 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SF3A2Q15428 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SF3A2Q15428 Y_RNA.118-201ENST00000363300 101 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.22□□□□□ -2.05
SF3A2Q15428 RNU6-83P-201ENST00000384568 112 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 SNORA41-201ENST00000384675 132 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 SNORA26.9-201ENST00000391322 122 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AL162578.1-201ENST00000406202 378 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.22□□□□□ -2.05
SF3A2Q15428 RNU6-1328P-201ENST00000410938 106 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 RPL22P18-201ENST00000417197 377 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 BTF3L4P3-201ENST00000418879 476 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.22□□□□□ -2.05
SF3A2Q15428 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.22□□□□□ -2.05
SF3A2Q15428 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SF3A2Q15428 AC007677.1-201ENST00000445757 515 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AP000542.1-201ENST00000448473 371 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 RBM43P1-201ENST00000476891 1081 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AL160314.1-201ENST00000490836 438 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.22□□□□□ -2.05
SF3A2Q15428 MTCYBP35-201ENST00000503630 1137 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 RNU6-390P-201ENST00000516259 103 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 RNA5SP290-201ENST00000517133 127 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.22□□□□□ -2.05
SF3A2Q15428 AL359212.1-201ENST00000556608 614 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 MTND3P12-201ENST00000559068 328 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AC090888.2-201ENST00000559765 1144 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
SF3A2Q15428 AC022662.1-201ENST00000580252 331 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.22□□□□□ -2.05
SF3A2Q15428 Z99289.3-201ENST00000605586 594 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.22□□□□□ -2.05
SF3A2Q15428 AC013562.2-201ENST00000611632 603 ntBASIC2.22□□□□□ -2.05
SF3A2Q15428 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SF3A2Q15428 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.22□□□□□ -2.05
SF3A2Q15428 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.22□□□□□ -2.05
SF3A2Q15428 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.22□□□□□ -2.05
SF3A2Q15428 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.22□□□□□ -2.05
SF3A2Q15428 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SF3A2Q15428 PABPC1P9-201ENST00000426076 1612 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SF3A2Q15428 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SF3A2Q15428 SNORA4.1-201ENST00000364263 144 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 RNU4-28P-201ENST00000364739 141 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.21□□□□□ -2.06
SF3A2Q15428 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 PIGPP2-201ENST00000411569 458 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 VPS26BP1-201ENST00000417155 755 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AC005005.2-201ENST00000420779 380 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SF3A2Q15428 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AC084290.1-201ENST00000434995 374 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AC018634.1-201ENST00000437554 401 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 MTATP6P30-201ENST00000443540 664 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 MTCO1P27-201ENST00000448269 226 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 USP9YP10-201ENST00000454868 628 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AC106872.3-201ENST00000495104 446 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SF3A2Q15428 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AC098591.2-201ENST00000510152 315 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SF3A2Q15428 RNA5SP82-201ENST00000516707 92 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 DUXAP5-201ENST00000529668 529 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.21□□□□□ -2.06
SF3A2Q15428 MTND4P33-201ENST00000556706 766 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AC021171.1-201ENST00000603137 706 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AL356280.1-201ENST00000603614 379 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AC107952.2-201ENST00000606048 486 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AC007349.4-201ENST00000608114 532 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 OR10AB1P-201ENST00000609613 938 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.21□□□□□ -2.06
SF3A2Q15428 AP002791.1-201ENST00000623291 381 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 AL356596.1-201ENST00000624230 379 ntBASIC2.21□□□□□ -2.06
SF3A2Q15428 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.21□□□□□ -2.06
SF3A2Q15428 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SF3A2Q15428 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SF3A2Q15428 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SF3A2Q15428 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
SF3A2Q15428 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SF3A2Q15428 RNU6-223P-201ENST00000362830 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms