Protein–RNA interactions for Protein: Q13509

TUBB3, Tubulin beta-3 chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3Q13509 VN1R36P-201ENST00000414936 291 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AL160275.3-201ENST00000423876 471 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AL591419.1-201ENST00000427423 339 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.69□□□□□ -1.82
TUBB3Q13509 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.69□□□□□ -1.82
TUBB3Q13509 AL591704.1-201ENST00000432574 275 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 MTCYBP6-201ENST00000441810 138 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.69□□□□□ -1.82
TUBB3Q13509 AC091153.1-201ENST00000466297 402 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 SNRPGP3-201ENST00000469405 227 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AL049874.1-201ENST00000489560 388 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.69□□□□□ -1.82
TUBB3Q13509 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.69□□□□□ -1.82
TUBB3Q13509 IGKV2D-19-201ENST00000523346 262 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.69□□□□□ -1.82
TUBB3Q13509 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TUBB3Q13509 MTCO3P23-201ENST00000561363 289 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.69□□□□□ -1.82
TUBB3Q13509 MIR4444-1-201ENST00000581696 74 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 MIR4444-2-201ENST00000584390 74 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 BNIP3P22-201ENST00000593399 556 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 KLKP1-201ENST00000595979 403 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 MIR15A-201ENST00000607334 83 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 MIR6075-201ENST00000620782 95 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 AL360181.4-201ENST00000621752 134 ntBASIC3.69□□□□□ -1.82
TUBB3Q13509 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TUBB3Q13509 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.69□□□□□ -1.82
TUBB3Q13509 SNORA63-201ENST00000363450 132 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 RNU6-434P-201ENST00000384376 107 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 RNU6-1297P-201ENST00000384415 104 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 SNORD116-29-201ENST00000384516 83 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 MIR184-201ENST00000384962 84 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.68□□□□□ -1.82
TUBB3Q13509 RAB9AP3-201ENST00000412737 573 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.68□□□□□ -1.82
TUBB3Q13509 AC080125.1-201ENST00000414888 684 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AF228730.4-201ENST00000421457 183 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AL139247.1-201ENST00000422768 325 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 HMGB1P27-201ENST00000431429 603 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AL358232.1-201ENST00000448030 501 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 RAB9AP1-201ENST00000449393 573 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.68□□□□□ -1.82
TUBB3Q13509 CEACAMP4-201ENST00000457676 421 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 Y_RNA.635-201ENST00000459041 101 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 RNU7-167P-201ENST00000459160 62 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.68□□□□□ -1.82
TUBB3Q13509 AC012181.1-201ENST00000479895 423 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC009901.1-201ENST00000506703 541 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 HMGN1P11-201ENST00000508668 303 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 RNA5SP164-201ENST00000516533 110 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 RNA5SP454-201ENST00000517231 127 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC022695.1-201ENST00000522089 237 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 COPS8P3-201ENST00000526024 482 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TUBB3Q13509 SNRPGP16-201ENST00000533275 226 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.68□□□□□ -1.82
TUBB3Q13509 AL442663.2-201ENST00000554385 511 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.68□□□□□ -1.82
TUBB3Q13509 AC022432.1-201ENST00000595739 310 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC008739.3-201ENST00000603262 127 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC005034.5-201ENST00000604219 466 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.68□□□□□ -1.82
TUBB3Q13509 FAM157A-202ENST00000615155 405 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 AC126177.8-201ENST00000618339 1015 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.68□□□□□ -1.82
TUBB3Q13509 MTND4LP32-201ENST00000636111 270 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
TUBB3Q13509 ZNF285B-201ENST00000561698 1767 ntBASIC3.68□□□□□ -1.82
TUBB3Q13509 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TUBB3Q13509 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TUBB3Q13509 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TUBB3Q13509 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TUBB3Q13509 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.67□□□□□ -1.82
TUBB3Q13509 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.67□□□□□ -1.82
TUBB3Q13509 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.67□□□□□ -1.82
TUBB3Q13509 SDAD1P2-201ENST00000441308 2028 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 OR4G2P-202ENST00000641004 1759 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 CEP170P1-201ENST00000502249 4587 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TUBB3Q13509 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 MIR514A1-201ENST00000385133 98 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 MIR450B-201ENST00000401182 78 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.67□□□□□ -1.82
TUBB3Q13509 RPS4XP7-201ENST00000406274 780 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.67□□□□□ -1.82
TUBB3Q13509 RPLP0P7-201ENST00000416050 667 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 BX842559.1-201ENST00000419615 532 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.67□□□□□ -1.82
TUBB3Q13509 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TUBB3Q13509 AC107399.1-201ENST00000451226 265 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.67□□□□□ -1.82
TUBB3Q13509 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.67□□□□□ -1.82
TUBB3Q13509 MTND5P5-201ENST00000503764 376 ntBASIC3.67□□□□□ -1.82
TUBB3Q13509 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TUBB3Q13509 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TUBB3Q13509 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.67□□□□□ -1.82
TUBB3Q13509 SNORA14.1-201ENST00000516113 141 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms