Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.36□□□□□ -1.71
SSRP1Q08945 AC090281.1-201ENST00000523019 276 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.36□□□□□ -1.71
SSRP1Q08945 VN1R85P-201ENST00000601587 426 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.36□□□□□ -1.71
SSRP1Q08945 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 AC005344.1-201ENST00000613391 459 ntBASIC4.36□□□□□ -1.71
SSRP1Q08945 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.36□□□□□ -1.71
SSRP1Q08945 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.36□□□□□ -1.71
SSRP1Q08945 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.36□□□□□ -1.71
SSRP1Q08945 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.36□□□□□ -1.71
SSRP1Q08945 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.36□□□□□ -1.71
SSRP1Q08945 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
SSRP1Q08945 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSRP1Q08945 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSRP1Q08945 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SSRP1Q08945 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSRP1Q08945 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSRP1Q08945 Y_RNA.259-201ENST00000364619 101 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 Y_RNA.315-201ENST00000365117 102 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 U3.42-201ENST00000408746 214 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.35□□□□□ -1.71
SSRP1Q08945 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.35□□□□□ -1.71
SSRP1Q08945 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.35□□□□□ -1.71
SSRP1Q08945 AL591419.1-201ENST00000427423 339 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.35□□□□□ -1.71
SSRP1Q08945 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.35□□□□□ -1.71
SSRP1Q08945 FABP5P14-201ENST00000437273 393 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 AL359672.1-201ENST00000442302 409 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 CECR9-201ENST00000453421 199 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 RNU7-138P-201ENST00000459479 64 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 AC091153.1-201ENST00000466297 402 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 AC104472.2-201ENST00000469035 601 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.35□□□□□ -1.71
SSRP1Q08945 RPS27P27-201ENST00000498779 255 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.35□□□□□ -1.71
SSRP1Q08945 AC087499.8-201ENST00000578406 226 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 MIR5685-201ENST00000579080 79 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 HMGB1P50-201ENST00000605814 607 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 AC126177.8-201ENST00000618339 1015 ntBASIC4.35□□□□□ -1.71
SSRP1Q08945 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.35□□□□□ -1.71
SSRP1Q08945 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SSRP1Q08945 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SSRP1Q08945 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
SSRP1Q08945 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSRP1Q08945 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSRP1Q08945 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.34□□□□□ -1.71
SSRP1Q08945 RNA5SP322-201ENST00000363617 119 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSRP1Q08945 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SSRP1Q08945 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 RNU2-3P-201ENST00000410144 191 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 RNU4-14P-201ENST00000410858 122 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 CYCSP33-201ENST00000414485 327 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.34□□□□□ -1.71
SSRP1Q08945 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.34□□□□□ -1.71
SSRP1Q08945 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SSRP1Q08945 RN7SL93P-201ENST00000463035 293 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.34□□□□□ -1.71
SSRP1Q08945 SLC25A15P5-201ENST00000508033 253 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.34□□□□□ -1.71
SSRP1Q08945 IMMP1LP2-201ENST00000552954 492 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 TRAV37-201ENST00000553906 342 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.34□□□□□ -1.71
SSRP1Q08945 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AL355365.1-201ENST00000616480 294 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 RMST_4.1-201ENST00000616886 107 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 AL713922.2-201ENST00000619384 716 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 AL359757.2-201ENST00000624309 274 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
SSRP1Q08945 MTND4P23-201ENST00000447723 1363 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
SSRP1Q08945 AC005183.1-201ENST00000603687 1979 ntBASIC4.34□□□□□ -1.71
SSRP1Q08945 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SSRP1Q08945 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.34□□□□□ -1.72
SSRP1Q08945 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SSRP1Q08945 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.33□□□□□ -1.72
SSRP1Q08945 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSRP1Q08945 AL672296.1-201ENST00000427780 2158 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSRP1Q08945 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.33□□□□□ -1.72
SSRP1Q08945 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.33□□□□□ -1.72
SSRP1Q08945 MIR412-201ENST00000362142 91 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 SNORA75B-201ENST00000384053 137 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SSRP1Q08945 MIR1302-11-201ENST00000408051 138 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 MIR1302-9-201ENST00000408365 138 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 MIR1302-10-201ENST00000408734 138 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SSRP1Q08945 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 AL139247.1-201ENST00000422768 325 ntBASIC4.33□□□□□ -1.72
SSRP1Q08945 MYL8P-204ENST00000431574 518 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms