Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC098799.2-201ENST00000509466 868 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 OSBPL9P5-201ENST00000542581 171 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.68□□□□□ -1.98
SCN1BQ07699 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN1BQ07699 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN1BQ07699 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SCN1BQ07699 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
SCN1BQ07699 NRBF2P1-201ENST00000587407 859 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AC121247.2-201ENST00000604776 136 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AC073657.2-201ENST00000605661 303 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 AL021997.1-201ENST00000605757 193 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.68□□□□□ -1.98
SCN1BQ07699 AL020991.1-201ENST00000612314 373 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.68□□□□□ -1.98
SCN1BQ07699 AC078883.4-201ENST00000623218 367 ntBASIC2.68□□□□□ -1.98
SCN1BQ07699 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SCN1BQ07699 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SCN1BQ07699 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 SNORD3E-201ENST00000362899 217 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AC009518.2-201ENST00000418056 731 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 RPL31P35-201ENST00000431058 377 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 RNU7-26P-201ENST00000458980 63 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 RNA5SP269-201ENST00000459032 137 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 SNORD42A-201ENST00000459584 64 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SCN1BQ07699 RBBP4P6-201ENST00000508098 202 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.67□□□□□ -1.98
SCN1BQ07699 SNORA18.6-201ENST00000516792 115 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AC107016.2-201ENST00000547968 190 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AC087883.1-201ENST00000551882 391 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AC008088.1-201ENST00000580993 280 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 MIR3158-1-201ENST00000583596 81 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AL022154.1-201ENST00000604698 785 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 uc_338.14-201ENST00000613162 166 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AC010678.1-201ENST00000614118 713 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 AC006133.1-201ENST00000617106 264 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.67□□□□□ -1.98
SCN1BQ07699 AC025034.2-201ENST00000623264 286 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 MIR7157-201ENST00000635801 60 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SCN1BQ07699 MTND5P30-201ENST00000452896 1731 ntBASIC2.67□□□□□ -1.98
SCN1BQ07699 FARSBP1-201ENST00000435808 1778 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SCN1BQ07699 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN1BQ07699 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SCN1BQ07699 RNU6-179P-201ENST00000363350 107 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 RNU6-61P-201ENST00000365528 109 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN1BQ07699 RNU6-748P-201ENST00000384648 107 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SCN1BQ07699 RPL30P4-201ENST00000429309 333 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 MTATP6P16-201ENST00000434543 526 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN1BQ07699 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN1BQ07699 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN1BQ07699 MTCYBP1-201ENST00000454315 1119 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN1BQ07699 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN1BQ07699 RPL21P13-201ENST00000488305 481 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 RN7SL20P-201ENST00000488827 297 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC022493.1-201ENST00000492984 337 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC090572.1-201ENST00000519251 160 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN1BQ07699 MTCYBP20-201ENST00000524239 1129 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN1BQ07699 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.66□□□□□ -1.98
SCN1BQ07699 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.66□□□□□ -1.98
SCN1BQ07699 AC025678.1-201ENST00000567861 338 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.66□□□□□ -1.98
SCN1BQ07699 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 MIR98-201ENST00000606724 119 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC073114.1-201ENST00000612027 490 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 AC011890.2-201ENST00000613393 294 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SCN1BQ07699 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SCN1BQ07699 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
SCN1BQ07699 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SCN1BQ07699 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms