Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 ATP1B3P1-201ENST00000605365 821 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AL391813.2-201ENST00000609113 322 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 AC108747.1-201ENST00000609508 535 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 MIR6895-201ENST00000613497 78 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 PISRT1-201ENST00000626175 531 ntBASIC2.37□□□□□ -2.03
CKAP4Q07065 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CKAP4Q07065 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.37□□□□□ -2.03
CKAP4Q07065 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.37□□□□□ -2.03
CKAP4Q07065 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 FARSBP1-201ENST00000435808 1778 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 RNU4-1-201ENST00000363925 141 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 MIR135A2-201ENST00000384854 100 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 MIR19A-201ENST00000384878 82 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 Y_RNA.582-201ENST00000391023 95 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 Y_RNA.599-201ENST00000410489 109 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 HMGB3P2-201ENST00000411913 584 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AL031779.1-201ENST00000415663 330 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.36□□□□□ -2.03
CKAP4Q07065 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC004866.2-201ENST00000438285 481 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.36□□□□□ -2.03
CKAP4Q07065 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 S100A11P2-201ENST00000467589 312 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC135721.1-201ENST00000497954 479 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC138853.1-201ENST00000503549 823 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.36□□□□□ -2.03
CKAP4Q07065 RN7SKP298-201ENST00000515950 94 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 Y_RNA.672-201ENST00000516289 104 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AP003181.2-201ENST00000528941 181 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.36□□□□□ -2.03
CKAP4Q07065 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.36□□□□□ -2.03
CKAP4Q07065 MIR3913-1-201ENST00000577744 102 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 MIR3682-201ENST00000581338 84 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC006023.1-201ENST00000603944 259 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AL031176.1-201ENST00000604554 466 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AL035413.2-201ENST00000604801 525 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC103710.1-201ENST00000610003 901 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC005332.10-201ENST00000612725 619 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC099842.1-201ENST00000619919 596 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC027309.3-201ENST00000623419 351 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.36□□□□□ -2.03
CKAP4Q07065 AC010149.2-201ENST00000637608 315 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CKAP4Q07065 MTND4P5-201ENST00000435821 1374 ntBASIC2.36□□□□□ -2.03
CKAP4Q07065 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CKAP4Q07065 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.35□□□□□ -2.03
CKAP4Q07065 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC093536.2-201ENST00000565257 1406 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CKAP4Q07065 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.35□□□□□ -2.03
CKAP4Q07065 Y_RNA.41-201ENST00000362646 102 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CKAP4Q07065 RNU6-1042P-201ENST00000384204 107 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CKAP4Q07065 RNU6-754P-201ENST00000391166 107 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CKAP4Q07065 SPA17P1-201ENST00000416656 452 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 C1DP2-201ENST00000418167 426 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.35□□□□□ -2.03
CKAP4Q07065 RAC1P7-201ENST00000445367 377 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.35□□□□□ -2.03
CKAP4Q07065 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.35□□□□□ -2.03
CKAP4Q07065 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC025033.1-201ENST00000463883 194 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 MTND1P3-201ENST00000484956 952 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC105252.1-201ENST00000503089 286 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC091133.4-201ENST00000511142 308 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
CKAP4Q07065 SNORA18.6-201ENST00000516792 115 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 RNU1-40P-201ENST00000516816 164 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 RNU1-97P-201ENST00000516872 164 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 MTCO2P4-201ENST00000517968 247 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC107934.1-201ENST00000522215 217 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AP000907.2-201ENST00000530827 353 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC010546.1-201ENST00000569391 485 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 OR4K8P-201ENST00000578842 1048 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.35□□□□□ -2.03
CKAP4Q07065 AC007621.1-201ENST00000604544 437 ntBASIC2.35□□□□□ -2.03
CKAP4Q07065 AL136363.1-201ENST00000605349 337 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms