Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC5Q00444 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.51□□□□□ -2.17
HOXC5Q00444 DPPA3P3-201ENST00000603842 430 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC091152.3-201ENST00000604227 325 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC069545.1-201ENST00000605671 358 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC099785.1-201ENST00000605697 437 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AL121652.1-201ENST00000608851 448 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXC5Q00444 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.51□□□□□ -2.17
HOXC5Q00444 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.51□□□□□ -2.17
HOXC5Q00444 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HOXC5Q00444 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HOXC5Q00444 AL161781.1-201ENST00000354277 403 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 RNU6-486P-201ENST00000363116 107 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.5□□□□□ -2.17
HOXC5Q00444 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HOXC5Q00444 RNU6-658P-201ENST00000384606 106 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 RNU6-754P-201ENST00000391166 107 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 AL627390.1-201ENST00000396055 340 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 RNU6-1140P-201ENST00000410517 106 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC5Q00444 EDDM3CP-201ENST00000415977 425 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 MRPS36P1-201ENST00000421291 307 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 AL353729.1-201ENST00000425044 720 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.5□□□□□ -2.17
HOXC5Q00444 HMGN2P10-201ENST00000448085 265 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 MTND1P31-201ENST00000449206 961 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AC005410.1-202ENST00000460347 485 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC5Q00444 MTND5P13-201ENST00000513046 1079 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 AC084851.1-201ENST00000529105 249 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AL121821.2-201ENST00000556081 394 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 ROCK1P1-201ENST00000573767 549 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 MIR3126-201ENST00000577443 74 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.5□□□□□ -2.17
HOXC5Q00444 AC005296.1-201ENST00000616145 209 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 AC009233.1-201ENST00000616477 371 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 AC231657.1-201ENST00000624313 397 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
HOXC5Q00444 ZNF702P-202ENST00000434269 1966 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.49□□□□□ -2.17
HOXC5Q00444 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.49□□□□□ -2.17
HOXC5Q00444 RNU6-19P-201ENST00000384718 107 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 U8.14-201ENST00000390843 143 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 RNU2-68P-201ENST00000410878 191 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.49□□□□□ -2.17
HOXC5Q00444 AL358453.1-201ENST00000422522 250 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 HMGN2P3-201ENST00000433603 273 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 HMGN2P5-201ENST00000436882 273 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 HMGB3P12-201ENST00000438745 556 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 MTND5P14-201ENST00000441481 1267 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.49□□□□□ -2.17
HOXC5Q00444 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.49□□□□□ -2.17
HOXC5Q00444 SSXP1-201ENST00000453640 473 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.49□□□□□ -2.17
HOXC5Q00444 AC008481.1-201ENST00000463278 396 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 FAM92A1P2-202ENST00000504766 877 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.49□□□□□ -2.17
HOXC5Q00444 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.49□□□□□ -2.17
HOXC5Q00444 RNA5SP112-201ENST00000515937 99 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.49□□□□□ -2.17
HOXC5Q00444 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.49□□□□□ -2.17
HOXC5Q00444 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.49□□□□□ -2.17
HOXC5Q00444 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HOXC5Q00444 AC023825.1-201ENST00000566704 1030 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AL353997.4-201ENST00000586196 166 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 NRBF2P1-201ENST00000587407 859 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AC011494.1-201ENST00000596454 237 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AL109620.1-201ENST00000618738 1197 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AC109809.1-201ENST00000619665 545 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 AC024581.2-201ENST00000619986 252 ntBASIC1.49□□□□□ -2.17
HOXC5Q00444 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
HOXC5Q00444 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.49□□□□□ -2.17
HOXC5Q00444 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXC5Q00444 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
HOXC5Q00444 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HOXC5Q00444 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HOXC5Q00444 RNU6-1167P-201ENST00000363227 94 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HOXC5Q00444 MIR1289-2-201ENST00000408360 111 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 POLHP1-201ENST00000411806 470 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.48□□□□□ -2.17
HOXC5Q00444 CYCSP49-201ENST00000420810 319 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AC096920.1-201ENST00000423991 241 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.48□□□□□ -2.17
HOXC5Q00444 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.48□□□□□ -2.17
HOXC5Q00444 RPL36AP53-201ENST00000432891 316 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXC5Q00444 AC016691.1-201ENST00000441321 413 ntBASIC1.48□□□□□ -2.17
HOXC5Q00444 MTCO3P45-201ENST00000443036 613 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms