Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MIR3122-201ENST00000577243 73 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC012254.4-201ENST00000588843 273 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 CYP2C61P-201ENST00000604072 290 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC009812.4-201ENST00000569134 1805 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
PRKDCP78527 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
PRKDCP78527 RNU6-1074P-201ENST00000383995 104 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 MIR934-201ENST00000401241 83 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AL356867.1-201ENST00000429623 299 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 Z77249.1-201ENST00000444622 1175 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC093770.1-201ENST00000511559 571 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.49□□□□□ -2.33
PRKDCP78527 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.49□□□□□ -2.33
PRKDCP78527 MIR5589-201ENST00000579442 60 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 MIR4422-201ENST00000581938 83 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 TPTE2P4-201ENST00000258589 1605 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.49□□□□□ -2.33
PRKDCP78527 AL035666.1-201ENST00000446195 348 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 SCARNA11.3-201ENST00000517276 130 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC118273.2-201ENST00000532092 465 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 SNRPGP16-201ENST00000533275 226 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.49□□□□□ -2.33
PRKDCP78527 AC008269.2-201ENST00000561915 1105 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC010615.3-201ENST00000597319 394 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC099842.1-201ENST00000619919 596 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.49□□□□□ -2.33
PRKDCP78527 RNA5SP299-201ENST00000391203 116 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC015908.1-201ENST00000478739 476 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.49□□□□□ -2.33
PRKDCP78527 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.49□□□□□ -2.33
PRKDCP78527 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
PRKDCP78527 UCA1.1-201ENST00000620952 75 ntBASIC0.49□□□□□ -2.33
PRKDCP78527 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.48□□□□□ -2.33
PRKDCP78527 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.48□□□□□ -2.33
PRKDCP78527 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.48□□□□□ -2.33
PRKDCP78527 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.48□□□□□ -2.33
PRKDCP78527 SNORD14A-201ENST00000606526 91 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 AC100821.1-201ENST00000523153 2479 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 RNU6-1251P-201ENST00000364502 107 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 MIR329-1-201ENST00000385028 80 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.48□□□□□ -2.33
PRKDCP78527 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.48□□□□□ -2.33
PRKDCP78527 AP002371.1-201ENST00000463604 433 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.48□□□□□ -2.33
PRKDCP78527 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.48□□□□□ -2.33
PRKDCP78527 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.48□□□□□ -2.33
PRKDCP78527 RNU6-263P-201ENST00000363811 107 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.48□□□□□ -2.33
PRKDCP78527 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.48□□□□□ -2.33
PRKDCP78527 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.48□□□□□ -2.33
PRKDCP78527 TPT1P8-201ENST00000510120 555 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 MED28P6-201ENST00000558776 231 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 BNIP3P26-201ENST00000600827 554 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 AL021879.1-201ENST00000611756 288 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 AC109454.4-201ENST00000623411 649 ntBASIC0.48□□□□□ -2.33
PRKDCP78527 RNU6-629P-201ENST00000384061 103 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 Y_RNA.488-201ENST00000384403 102 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.47□□□□□ -2.33
PRKDCP78527 AC093716.1-201ENST00000435923 377 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 RPS15AP27-201ENST00000449183 343 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 TRGVB-201ENST00000453257 471 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 RNU6-758P-201ENST00000516292 89 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
PRKDCP78527 SNORA3A-201ENST00000364113 130 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 MIR1302-8-201ENST00000408342 128 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AL356320.2-201ENST00000417263 507 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC099677.1-201ENST00000420575 175 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 RABEPKP1-201ENST00000440529 1026 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.47□□□□□ -2.33
PRKDCP78527 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC0.47□□□□□ -2.33
PRKDCP78527 AC117454.1-201ENST00000491120 168 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 RNF138P1-201ENST00000502765 546 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.47□□□□□ -2.33
PRKDCP78527 FAM157A-202ENST00000615155 405 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC073308.1-201ENST00000623696 305 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 MIR7157-201ENST00000635801 60 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 U8.14-201ENST00000390843 143 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.47□□□□□ -2.33
PRKDCP78527 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
PRKDCP78527 AL591043.1-201ENST00000432461 424 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC018437.1-201ENST00000492214 406 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC008834.1-201ENST00000511612 175 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 AC243829.3-201ENST00000622177 108 ntBASIC0.47□□□□□ -2.33
PRKDCP78527 SNRPGP6-201ENST00000451124 220 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 AC078857.1-201ENST00000469870 667 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.46□□□□□ -2.34
PRKDCP78527 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.46□□□□□ -2.34
PRKDCP78527 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.46□□□□□ -2.34
PRKDCP78527 AL096840.1-201ENST00000603287 93 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 AC093838.1-201ENST00000613014 469 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.46□□□□□ -2.34
PRKDCP78527 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 CR848007.1-201ENST00000442354 1699 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 RNU6-697P-201ENST00000363348 107 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 AL138880.1-201ENST00000405824 642 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 Y_RNA.610-201ENST00000410681 103 ntBASIC0.46□□□□□ -2.34
PRKDCP78527 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms