Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.73□□□□□ -2.13
TPM4P67936 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.73□□□□□ -2.13
TPM4P67936 MTCO1P53-201ENST00000441633 699 ntBASIC1.73□□□□□ -2.13
TPM4P67936 MTND2P30-201ENST00000456663 382 ntBASIC1.73□□□□□ -2.13
TPM4P67936 RNU6-775P-201ENST00000459318 96 ntBASIC1.73□□□□□ -2.13
TPM4P67936 RPL23AP63-201ENST00000498752 471 ntBASIC1.73□□□□□ -2.13
TPM4P67936 SNORA25.11-201ENST00000515935 105 ntBASIC1.73□□□□□ -2.13
TPM4P67936 RNU6-250P-201ENST00000516958 103 ntBASIC1.73□□□□□ -2.13
TPM4P67936 SNORA48.11-201ENST00000517015 89 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AC034114.1-201ENST00000520293 285 ntBASIC1.73□□□□□ -2.13
TPM4P67936 EEF1A1P37-201ENST00000522748 715 ntBASIC1.73□□□□□ -2.13
TPM4P67936 RANP3-201ENST00000530970 276 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.73□□□□□ -2.13
TPM4P67936 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.73□□□□□ -2.13
TPM4P67936 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.73□□□□□ -2.13
TPM4P67936 MRPS36P5-201ENST00000551909 298 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AC022254.1-201ENST00000567857 235 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AC122134.1-202ENST00000569111 1201 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AL354943.1-201ENST00000572103 781 ntBASIC1.73□□□□□ -2.13
TPM4P67936 MIR4285-201ENST00000581001 85 ntBASIC1.73□□□□□ -2.13
TPM4P67936 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AC126118.1-201ENST00000607744 628 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AC005332.6-201ENST00000613178 446 ntBASIC1.73□□□□□ -2.13
TPM4P67936 TUG1_2.1-201ENST00000614234 87 ntBASIC1.73□□□□□ -2.13
TPM4P67936 AL357080.1-201ENST00000617394 239 ntBASIC1.73□□□□□ -2.13
TPM4P67936 MTND4P21-201ENST00000453886 1357 ntBASIC1.72□□□□□ -2.13
TPM4P67936 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TPM4P67936 MIR561-201ENST00000385216 97 ntBASIC1.72□□□□□ -2.13
TPM4P67936 RNA5SP212-201ENST00000391223 107 ntBASIC1.72□□□□□ -2.13
TPM4P67936 RSL24D1P4-201ENST00000400938 484 ntBASIC1.72□□□□□ -2.13
TPM4P67936 MIR1304-201ENST00000408243 91 ntBASIC1.72□□□□□ -2.13
TPM4P67936 VN1R36P-201ENST00000414936 291 ntBASIC1.72□□□□□ -2.13
TPM4P67936 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.72□□□□□ -2.13
TPM4P67936 MTND2P29-201ENST00000438595 412 ntBASIC1.72□□□□□ -2.13
TPM4P67936 AC008379.1-201ENST00000463655 464 ntBASIC1.72□□□□□ -2.13
TPM4P67936 RPL36AP48-201ENST00000485521 314 ntBASIC1.72□□□□□ -2.13
TPM4P67936 AC018868.1-201ENST00000491307 315 ntBASIC1.72□□□□□ -2.13
TPM4P67936 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.72□□□□□ -2.13
TPM4P67936 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TPM4P67936 AP003497.1-201ENST00000528472 562 ntBASIC1.72□□□□□ -2.13
TPM4P67936 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
TPM4P67936 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.72□□□□□ -2.13
TPM4P67936 MIR4713-201ENST00000582691 75 ntBASIC1.72□□□□□ -2.13
TPM4P67936 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.72□□□□□ -2.13
TPM4P67936 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.72□□□□□ -2.13
TPM4P67936 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.72□□□□□ -2.13
TPM4P67936 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TPM4P67936 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.72□□□□□ -2.13
TPM4P67936 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
TPM4P67936 AC107982.1-201ENST00000507171 1300 ntBASIC1.71□□□□□ -2.14
TPM4P67936 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TPM4P67936 MIR449A-201ENST00000362113 91 ntBASIC1.71□□□□□ -2.14
TPM4P67936 U8.2-201ENST00000363156 134 ntBASIC1.71□□□□□ -2.14
TPM4P67936 RNU6-343P-201ENST00000364709 104 ntBASIC1.71□□□□□ -2.14
TPM4P67936 MIR320A-201ENST00000385302 82 ntBASIC1.71□□□□□ -2.14
TPM4P67936 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.71□□□□□ -2.14
TPM4P67936 BTF3L4P3-201ENST00000418879 476 ntBASIC1.71□□□□□ -2.14
TPM4P67936 AL445669.1-201ENST00000426743 755 ntBASIC1.71□□□□□ -2.14
TPM4P67936 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.71□□□□□ -2.14
TPM4P67936 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.71□□□□□ -2.14
TPM4P67936 FO393415.2-201ENST00000480085 343 ntBASIC1.71□□□□□ -2.14
TPM4P67936 RNU6-703P-201ENST00000516946 107 ntBASIC1.71□□□□□ -2.14
TPM4P67936 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.71□□□□□ -2.14
TPM4P67936 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.71□□□□□ -2.14
TPM4P67936 AC103810.8-201ENST00000607347 118 ntBASIC1.71□□□□□ -2.14
TPM4P67936 AP005229.2-201ENST00000609980 697 ntBASIC1.71□□□□□ -2.14
TPM4P67936 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.71□□□□□ -2.14
TPM4P67936 AL445264.1-201ENST00000621719 171 ntBASIC1.71□□□□□ -2.14
TPM4P67936 AC097460.3-201ENST00000623099 442 ntBASIC1.71□□□□□ -2.14
TPM4P67936 SCARNA15.3-201ENST00000626315 122 ntBASIC1.71□□□□□ -2.14
TPM4P67936 SCARNA4.1-201ENST00000628597 123 ntBASIC1.71□□□□□ -2.14
TPM4P67936 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
TPM4P67936 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.7□□□□□ -2.14
TPM4P67936 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
TPM4P67936 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
TPM4P67936 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
TPM4P67936 RNU6-658P-201ENST00000384606 106 ntBASIC1.7□□□□□ -2.14
TPM4P67936 SNORD65.1-201ENST00000390889 71 ntBASIC1.7□□□□□ -2.14
TPM4P67936 MTND1P21-201ENST00000412991 285 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC074117.2-201ENST00000417130 397 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AL449283.1-202ENST00000418249 604 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC068587.2-201ENST00000478386 781 ntBASIC1.7□□□□□ -2.14
TPM4P67936 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
TPM4P67936 AC008628.1-201ENST00000508663 265 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC008834.1-201ENST00000511612 175 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.7□□□□□ -2.14
TPM4P67936 MTND5P13-201ENST00000513046 1079 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.7□□□□□ -2.14
TPM4P67936 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.7□□□□□ -2.14
TPM4P67936 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.7□□□□□ -2.14
TPM4P67936 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.7□□□□□ -2.14
TPM4P67936 LINC00557-201ENST00000563184 1279 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC026271.5-201ENST00000577873 130 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.7□□□□□ -2.14
TPM4P67936 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.7□□□□□ -2.14
TPM4P67936 AC009237.15-201ENST00000610252 501 ntBASIC1.7□□□□□ -2.14
TPM4P67936 AC008759.3-201ENST00000613300 508 ntBASIC1.7□□□□□ -2.14
TPM4P67936 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TPM4P67936 MTND5P10-201ENST00000603719 1809 ntBASIC1.69□□□□□ -2.14
TPM4P67936 RNU6-97P-201ENST00000363387 104 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms